RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 KRTAP2-1Q9BYU5 128 aa5.48□□□□□ -1.53
CLSTN1-205ENST00000477264 KRTAP19-4Q3LI73 84 aa5.44□□□□□ -1.54
CLSTN1-205ENST00000477264 KRTAP9-6A8MVA2 160 aa5.38□□□□□ -1.55
CLSTN1-205ENST00000477264 LCE3BQ5TA77 95 aa5.38□□□□□ -1.55
CLSTN1-205ENST00000477264 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
CLSTN1-205ENST00000477264 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
CLSTN1-205ENST00000477264 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
CLSTN1-205ENST00000477264 KMT2DO14686 5537 aa5.31□□□□□ -1.56
CLSTN1-205ENST00000477264 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
CLSTN1-205ENST00000477264 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
CLSTN1-205ENST00000477264 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
CLSTN1-205ENST00000477264 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
CLSTN1-205ENST00000477264 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
CLSTN1-205ENST00000477264 MT1LQ93083 61 aa5.1□□□□□ -1.59
CLSTN1-205ENST00000477264 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
CLSTN1-205ENST00000477264 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
CLSTN1-205ENST00000477264 MT1EP04732 61 aa5.06□□□□□ -1.6
CLSTN1-205ENST00000477264 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
CLSTN1-205ENST00000477264 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
CLSTN1-205ENST00000477264 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
CLSTN1-205ENST00000477264 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
CLSTN1-205ENST00000477264 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
CLSTN1-205ENST00000477264 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
CLSTN1-205ENST00000477264 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
CLSTN1-205ENST00000477264 KRTAP4-9Q9BYQ8 210 aa4.87□□□□□ -1.63
CLSTN1-205ENST00000477264 NEBP20929 6669 aa4.85□□□□□ -1.63
CLSTN1-205ENST00000477264 MT1GP13640 62 aa4.84□□□□□ -1.63
CLSTN1-205ENST00000477264 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
CLSTN1-205ENST00000477264 MT1MQ8N339 61 aa4.77□□□□□ -1.65
CLSTN1-205ENST00000477264 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
CLSTN1-205ENST00000477264 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
CLSTN1-205ENST00000477264 SPRR2EP22531 72 aa4.75□□□□□ -1.65
CLSTN1-205ENST00000477264 SPRR2BP35325 72 aa4.75□□□□□ -1.65
CLSTN1-205ENST00000477264 SPRR2AP35326 72 aa4.75□□□□□ -1.65
CLSTN1-205ENST00000477264 KRTAP4-11Q9BYQ6 195 aa4.73□□□□□ -1.65
CLSTN1-205ENST00000477264 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
CLSTN1-205ENST00000477264 KRTAP20-1Q3LI63 56 aa4.68□□□□□ -1.66
CLSTN1-205ENST00000477264 KRTAP4-3Q9BYR4 195 aa4.67□□□□□ -1.66
CLSTN1-205ENST00000477264 MT1AP04731 61 aa4.6□□□□□ -1.67
CLSTN1-205ENST00000477264 SPRR2DP22532 72 aa4.58□□□□□ -1.68
CLSTN1-205ENST00000477264 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
CLSTN1-205ENST00000477264 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
CLSTN1-205ENST00000477264 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
CLSTN1-205ENST00000477264 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
CLSTN1-205ENST00000477264 PRM1P04553 51 aa4.37□□□□□ -1.71
CLSTN1-205ENST00000477264 KRTAP5-5Q701N2 237 aaPredicted RBP4.36□□□□□ -1.71
CLSTN1-205ENST00000477264 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
CLSTN1-205ENST00000477264 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
CLSTN1-205ENST00000477264 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CLSTN1-205ENST00000477264 KRTAP5-4Q6L8H1 288 aa4.09□□□□□ -1.76
CLSTN1-205ENST00000477264 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
CLSTN1-205ENST00000477264 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
CLSTN1-205ENST00000477264 MT4P47944 62 aa3.98□□□□□ -1.77
CLSTN1-205ENST00000477264 HMCN1Q96RW7 5635 aa3.88□□□□□ -1.79
CLSTN1-205ENST00000477264 MT3P25713 68 aa3.85□□□□□ -1.79
CLSTN1-205ENST00000477264 KRTAP20-2Q3LI61 65 aa3.85□□□□□ -1.79
CLSTN1-205ENST00000477264 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
CLSTN1-205ENST00000477264 KRTAP5-2Q701N4 177 aa3.7□□□□□ -1.82
CLSTN1-205ENST00000477264 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
CLSTN1-205ENST00000477264 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
CLSTN1-205ENST00000477264 KRTAP5-7Q6L8G8 165 aa3.55□□□□□ -1.84
CLSTN1-205ENST00000477264 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
CLSTN1-205ENST00000477264 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
CLSTN1-205ENST00000477264 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
CLSTN1-205ENST00000477264 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
CLSTN1-205ENST00000477264 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
CLSTN1-205ENST00000477264 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
CLSTN1-205ENST00000477264 AHNAKQ09666 5890 aaKnown RBP3.14□□□□□ -1.91
CLSTN1-205ENST00000477264 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
CLSTN1-205ENST00000477264 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
CLSTN1-205ENST00000477264 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
CLSTN1-205ENST00000477264 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CLSTN1-205ENST00000477264 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
CLSTN1-205ENST00000477264 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CLSTN1-205ENST00000477264 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CLSTN1-205ENST00000477264 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CLSTN1-205ENST00000477264 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
CLSTN1-205ENST00000477264 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms