RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 BRK1Q8WUW1 75 aa4.6□□□□□ -1.67
LSM2-212ENST00000477182 C10orf95Q9H7T3 257 aa4.6□□□□□ -1.67
LSM2-212ENST00000477182 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
LSM2-212ENST00000477182 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
LSM2-212ENST00000477182 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
LSM2-212ENST00000477182 KRTAP10-12P60413 245 aa4.53□□□□□ -1.68
LSM2-212ENST00000477182 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
LSM2-212ENST00000477182 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
LSM2-212ENST00000477182 TNP1P09430 55 aa4.49□□□□□ -1.69
LSM2-212ENST00000477182 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
LSM2-212ENST00000477182 HMCN1Q96RW7 5635 aa4.48□□□□□ -1.69
LSM2-212ENST00000477182 KRTAP5-10Q6L8G5 202 aa4.45□□□□□ -1.7
LSM2-212ENST00000477182 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
LSM2-212ENST00000477182 ROMO1P60602 79 aa4.44□□□□□ -1.7
LSM2-212ENST00000477182 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
LSM2-212ENST00000477182 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
LSM2-212ENST00000477182 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
LSM2-212ENST00000477182 MT4P47944 62 aa4.35□□□□□ -1.71
LSM2-212ENST00000477182 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
LSM2-212ENST00000477182 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
LSM2-212ENST00000477182 PRO0628Q9UI54 55 aa4.34□□□□□ -1.71
LSM2-212ENST00000477182 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
LSM2-212ENST00000477182 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
LSM2-212ENST00000477182 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
LSM2-212ENST00000477182 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
LSM2-212ENST00000477182 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
LSM2-212ENST00000477182 KRTAP19-3Q7Z4W3 81 aa4.23□□□□□ -1.73
LSM2-212ENST00000477182 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
LSM2-212ENST00000477182 MT1EP04732 61 aa4.21□□□□□ -1.74
LSM2-212ENST00000477182 PP632Q6XCG6 107 aa4.19□□□□□ -1.74
LSM2-212ENST00000477182 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
LSM2-212ENST00000477182 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
LSM2-212ENST00000477182 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
LSM2-212ENST00000477182 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
LSM2-212ENST00000477182 MT1LQ93083 61 aa4.09□□□□□ -1.75
LSM2-212ENST00000477182 MT1GP13640 62 aa4.08□□□□□ -1.76
LSM2-212ENST00000477182 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
LSM2-212ENST00000477182 KTN1-AS1Q86SY8 53 aa4.06□□□□□ -1.76
LSM2-212ENST00000477182 MT1MQ8N339 61 aa3.99□□□□□ -1.77
LSM2-212ENST00000477182 KRTAP4-7Q9BYR0 210 aa3.99□□□□□ -1.77
LSM2-212ENST00000477182 KRTAP20-2Q3LI61 65 aa3.94□□□□□ -1.78
LSM2-212ENST00000477182 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
LSM2-212ENST00000477182 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
LSM2-212ENST00000477182 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
LSM2-212ENST00000477182 AHNAKQ09666 5890 aaKnown RBP3.84□□□□□ -1.79
LSM2-212ENST00000477182 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
LSM2-212ENST00000477182 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
LSM2-212ENST00000477182 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
LSM2-212ENST00000477182 MUC5BQ9HC84 5762 aaPredicted RBP3.78□□□□□ -1.81
LSM2-212ENST00000477182 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
LSM2-212ENST00000477182 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
LSM2-212ENST00000477182 KRTAP5-8O75690 187 aa3.65□□□□□ -1.83
LSM2-212ENST00000477182 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
LSM2-212ENST00000477182 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
LSM2-212ENST00000477182 MT1AP04731 61 aa3.48□□□□□ -1.85
LSM2-212ENST00000477182 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
LSM2-212ENST00000477182 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
LSM2-212ENST00000477182 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
LSM2-212ENST00000477182 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
LSM2-212ENST00000477182 KRTAP6-2Q3LI66 62 aa3.25□□□□□ -1.89
LSM2-212ENST00000477182 MT3P25713 68 aa3.16□□□□□ -1.9
LSM2-212ENST00000477182 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
LSM2-212ENST00000477182 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
LSM2-212ENST00000477182 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
LSM2-212ENST00000477182 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
LSM2-212ENST00000477182 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
LSM2-212ENST00000477182 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
LSM2-212ENST00000477182 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
LSM2-212ENST00000477182 KRTAP5-11Q6L8G4 156 aa2.68□□□□□ -1.98
LSM2-212ENST00000477182 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
LSM2-212ENST00000477182 INE1O15225 51 aa2.54□□□□□ -2
LSM2-212ENST00000477182 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
LSM2-212ENST00000477182 PRM1P04553 51 aa2.31□□□□□ -2.04
LSM2-212ENST00000477182 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
LSM2-212ENST00000477182 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
LSM2-212ENST00000477182 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
LSM2-212ENST00000477182 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
LSM2-212ENST00000477182 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 81.5 ms