RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SPRR2EP22531 72 aa3.75□□□□□ -1.81
HDAC3-208ENST00000476739 SPRR2BP35325 72 aa3.75□□□□□ -1.81
HDAC3-208ENST00000476739 SPRR2AP35326 72 aa3.75□□□□□ -1.81
HDAC3-208ENST00000476739 INE1O15225 51 aa3.73□□□□□ -1.81
HDAC3-208ENST00000476739 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
HDAC3-208ENST00000476739 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
HDAC3-208ENST00000476739 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
HDAC3-208ENST00000476739 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
HDAC3-208ENST00000476739 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
HDAC3-208ENST00000476739 SPRR2DP22532 72 aa3.62□□□□□ -1.83
HDAC3-208ENST00000476739 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
HDAC3-208ENST00000476739 MT1EP04732 61 aa3.61□□□□□ -1.83
HDAC3-208ENST00000476739 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
HDAC3-208ENST00000476739 TNP1P09430 55 aa3.57□□□□□ -1.84
HDAC3-208ENST00000476739 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
HDAC3-208ENST00000476739 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
HDAC3-208ENST00000476739 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
HDAC3-208ENST00000476739 LCE3BQ5TA77 95 aa3.52□□□□□ -1.85
HDAC3-208ENST00000476739 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
HDAC3-208ENST00000476739 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
HDAC3-208ENST00000476739 DSTQ03001 7570 aaKnown RBP3.46□□□□□ -1.86
HDAC3-208ENST00000476739 MT1LQ93083 61 aa3.46□□□□□ -1.86
HDAC3-208ENST00000476739 MT1GP13640 62 aa3.45□□□□□ -1.86
HDAC3-208ENST00000476739 MT1MQ8N339 61 aa3.43□□□□□ -1.86
HDAC3-208ENST00000476739 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
HDAC3-208ENST00000476739 KRTAP4-3Q9BYR4 195 aa3.38□□□□□ -1.87
HDAC3-208ENST00000476739 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
HDAC3-208ENST00000476739 KRTAP4-9Q9BYQ8 210 aa3.27□□□□□ -1.89
HDAC3-208ENST00000476739 LCE1DQ5T752 114 aa3.19□□□□□ -1.9
HDAC3-208ENST00000476739 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
HDAC3-208ENST00000476739 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
HDAC3-208ENST00000476739 MT4P47944 62 aa3.18□□□□□ -1.9
HDAC3-208ENST00000476739 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
HDAC3-208ENST00000476739 LCE3CQ5T5A8 94 aa3.15□□□□□ -1.91
HDAC3-208ENST00000476739 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
HDAC3-208ENST00000476739 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
HDAC3-208ENST00000476739 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
HDAC3-208ENST00000476739 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.92
HDAC3-208ENST00000476739 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
HDAC3-208ENST00000476739 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
HDAC3-208ENST00000476739 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
HDAC3-208ENST00000476739 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
HDAC3-208ENST00000476739 KRTAP12-4P60329 112 aa2.97□□□□□ -1.93
HDAC3-208ENST00000476739 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
HDAC3-208ENST00000476739 MT1AP04731 61 aa2.94□□□□□ -1.94
HDAC3-208ENST00000476739 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
HDAC3-208ENST00000476739 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
HDAC3-208ENST00000476739 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
HDAC3-208ENST00000476739 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
HDAC3-208ENST00000476739 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
HDAC3-208ENST00000476739 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
HDAC3-208ENST00000476739 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
HDAC3-208ENST00000476739 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
HDAC3-208ENST00000476739 MT3P25713 68 aa2.67□□□□□ -1.98
HDAC3-208ENST00000476739 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
HDAC3-208ENST00000476739 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
HDAC3-208ENST00000476739 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
HDAC3-208ENST00000476739 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
HDAC3-208ENST00000476739 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
HDAC3-208ENST00000476739 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
HDAC3-208ENST00000476739 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
HDAC3-208ENST00000476739 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
HDAC3-208ENST00000476739 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
HDAC3-208ENST00000476739 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
HDAC3-208ENST00000476739 LCE1BQ5T7P3 118 aa2.29□□□□□ -2.04
HDAC3-208ENST00000476739 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
HDAC3-208ENST00000476739 PRM1P04553 51 aa2.26□□□□□ -2.05
HDAC3-208ENST00000476739 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
HDAC3-208ENST00000476739 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
HDAC3-208ENST00000476739 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
HDAC3-208ENST00000476739 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
HDAC3-208ENST00000476739 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
HDAC3-208ENST00000476739 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
HDAC3-208ENST00000476739 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
HDAC3-208ENST00000476739 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
HDAC3-208ENST00000476739 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
HDAC3-208ENST00000476739 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
HDAC3-208ENST00000476739 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 91.8 ms