RNA–Protein interactions for RNA: ENST00000476701.5

SDK1-206, Transcript of sidekick cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene SDK1, Length 3,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1-206ENST00000476701 FCGBPQ9Y6R7 5405 aaPredicted RBP4.14□□□□□ -1.75
SDK1-206ENST00000476701 KRTAP2-3P0C7H8 128 aa4.11□□□□□ -1.75
SDK1-206ENST00000476701 KRTAP2-4Q9BYR9 128 aa4.11□□□□□ -1.75
SDK1-206ENST00000476701 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
SDK1-206ENST00000476701 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
SDK1-206ENST00000476701 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.75
SDK1-206ENST00000476701 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
SDK1-206ENST00000476701 MT1LQ93083 61 aa4.08□□□□□ -1.76
SDK1-206ENST00000476701 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
SDK1-206ENST00000476701 MT1EP04732 61 aa4.06□□□□□ -1.76
SDK1-206ENST00000476701 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
SDK1-206ENST00000476701 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
SDK1-206ENST00000476701 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
SDK1-206ENST00000476701 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
SDK1-206ENST00000476701 MT1GP13640 62 aa3.99□□□□□ -1.77
SDK1-206ENST00000476701 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
SDK1-206ENST00000476701 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
SDK1-206ENST00000476701 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
SDK1-206ENST00000476701 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
SDK1-206ENST00000476701 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
SDK1-206ENST00000476701 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
SDK1-206ENST00000476701 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
SDK1-206ENST00000476701 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
SDK1-206ENST00000476701 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
SDK1-206ENST00000476701 MT1MQ8N339 61 aa3.8□□□□□ -1.8
SDK1-206ENST00000476701 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
SDK1-206ENST00000476701 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
SDK1-206ENST00000476701 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
SDK1-206ENST00000476701 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
SDK1-206ENST00000476701 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
SDK1-206ENST00000476701 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
SDK1-206ENST00000476701 KRTAP9-7A8MTY7 169 aa3.7□□□□□ -1.82
SDK1-206ENST00000476701 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
SDK1-206ENST00000476701 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
SDK1-206ENST00000476701 PRM1P04553 51 aa3.55□□□□□ -1.84
SDK1-206ENST00000476701 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
SDK1-206ENST00000476701 MT3P25713 68 aa3.49□□□□□ -1.85
SDK1-206ENST00000476701 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
SDK1-206ENST00000476701 MT1AP04731 61 aa3.39□□□□□ -1.87
SDK1-206ENST00000476701 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SDK1-206ENST00000476701 SPRR2EP22531 72 aa3.38□□□□□ -1.87
SDK1-206ENST00000476701 SPRR2BP35325 72 aa3.38□□□□□ -1.87
SDK1-206ENST00000476701 SPRR2AP35326 72 aa3.38□□□□□ -1.87
SDK1-206ENST00000476701 KRTAP5-9P26371 169 aa3.34□□□□□ -1.87
SDK1-206ENST00000476701 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
SDK1-206ENST00000476701 SPRR2DP22532 72 aa3.22□□□□□ -1.89
SDK1-206ENST00000476701 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
SDK1-206ENST00000476701 NEBP20929 6669 aa3.05□□□□□ -1.92
SDK1-206ENST00000476701 MT4P47944 62 aa3.01□□□□□ -1.93
SDK1-206ENST00000476701 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
SDK1-206ENST00000476701 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SDK1-206ENST00000476701 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
SDK1-206ENST00000476701 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
SDK1-206ENST00000476701 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SDK1-206ENST00000476701 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
SDK1-206ENST00000476701 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
SDK1-206ENST00000476701 KRTAP5-2Q701N4 177 aa2.65□□□□□ -1.99
SDK1-206ENST00000476701 KRTAP4-11Q9BYQ6 195 aa2.64□□□□□ -1.99
SDK1-206ENST00000476701 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
SDK1-206ENST00000476701 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
SDK1-206ENST00000476701 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
SDK1-206ENST00000476701 KRTAP20-1Q3LI63 56 aa2.57□□□□□ -2
SDK1-206ENST00000476701 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
SDK1-206ENST00000476701 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
SDK1-206ENST00000476701 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
SDK1-206ENST00000476701 KRTAP4-2Q9BYR5 136 aa2.33□□□□□ -2.04
SDK1-206ENST00000476701 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
SDK1-206ENST00000476701 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
SDK1-206ENST00000476701 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
SDK1-206ENST00000476701 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
SDK1-206ENST00000476701 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
SDK1-206ENST00000476701 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
SDK1-206ENST00000476701 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
SDK1-206ENST00000476701 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
SDK1-206ENST00000476701 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
SDK1-206ENST00000476701 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
SDK1-206ENST00000476701 PHGR1C9JFL3 82 aa1.7□□□□□ -2.14
SDK1-206ENST00000476701 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 122.3 ms