RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 KRTAP19-7Q3SYF9 63 aa6.12□□□□□ -1.43
CCM2-207ENST00000475551 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
CCM2-207ENST00000475551 KMT2DO14686 5537 aa6.08□□□□□ -1.44
CCM2-207ENST00000475551 MACF1Q9UPN3 7388 aaKnown RBP5.98□□□□□ -1.45
CCM2-207ENST00000475551 MT1LQ93083 61 aa5.98□□□□□ -1.45
CCM2-207ENST00000475551 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
CCM2-207ENST00000475551 MT1EP04732 61 aa5.91□□□□□ -1.46
CCM2-207ENST00000475551 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
CCM2-207ENST00000475551 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
CCM2-207ENST00000475551 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
CCM2-207ENST00000475551 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
CCM2-207ENST00000475551 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
CCM2-207ENST00000475551 KRTAP5-9P26371 169 aa5.65□□□□□ -1.51
CCM2-207ENST00000475551 KRTAP12-4P60329 112 aa5.65□□□□□ -1.51
CCM2-207ENST00000475551 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
CCM2-207ENST00000475551 MT1GP13640 62 aa5.58□□□□□ -1.52
CCM2-207ENST00000475551 KRTAP4-3Q9BYR4 195 aa5.57□□□□□ -1.52
CCM2-207ENST00000475551 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
CCM2-207ENST00000475551 MT1MQ8N339 61 aa5.49□□□□□ -1.53
CCM2-207ENST00000475551 SPRR2EP22531 72 aa5.45□□□□□ -1.54
CCM2-207ENST00000475551 SPRR2BP35325 72 aa5.45□□□□□ -1.54
CCM2-207ENST00000475551 SPRR2AP35326 72 aa5.45□□□□□ -1.54
CCM2-207ENST00000475551 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
CCM2-207ENST00000475551 KRTAP19-3Q7Z4W3 81 aa5.43□□□□□ -1.54
CCM2-207ENST00000475551 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
CCM2-207ENST00000475551 NEBP20929 6669 aa5.31□□□□□ -1.56
CCM2-207ENST00000475551 MT1AP04731 61 aa5.28□□□□□ -1.56
CCM2-207ENST00000475551 LCE3BQ5TA77 95 aa5.26□□□□□ -1.57
CCM2-207ENST00000475551 SPRR2DP22532 72 aa5.24□□□□□ -1.57
CCM2-207ENST00000475551 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
CCM2-207ENST00000475551 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
CCM2-207ENST00000475551 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
CCM2-207ENST00000475551 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
CCM2-207ENST00000475551 LCE3EQ5T5B0 92 aa5.1□□□□□ -1.59
CCM2-207ENST00000475551 KRTAP5-5Q701N2 237 aaPredicted RBP5.08□□□□□ -1.6
CCM2-207ENST00000475551 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
CCM2-207ENST00000475551 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
CCM2-207ENST00000475551 PRM1P04553 51 aa5.04□□□□□ -1.6
CCM2-207ENST00000475551 KRTAP20-1Q3LI63 56 aa5.02□□□□□ -1.61
CCM2-207ENST00000475551 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
CCM2-207ENST00000475551 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
CCM2-207ENST00000475551 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
CCM2-207ENST00000475551 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.66
CCM2-207ENST00000475551 LCE4AQ5TA78 99 aa4.62□□□□□ -1.67
CCM2-207ENST00000475551 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
CCM2-207ENST00000475551 MT4P47944 62 aa4.59□□□□□ -1.67
CCM2-207ENST00000475551 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
CCM2-207ENST00000475551 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
CCM2-207ENST00000475551 KRTAP4-6Q9BYQ5 205 aa4.52□□□□□ -1.69
CCM2-207ENST00000475551 MT3P25713 68 aa4.48□□□□□ -1.69
CCM2-207ENST00000475551 HMCN1Q96RW7 5635 aa4.45□□□□□ -1.7
CCM2-207ENST00000475551 KRTAP20-2Q3LI61 65 aa4.38□□□□□ -1.71
CCM2-207ENST00000475551 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
CCM2-207ENST00000475551 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
CCM2-207ENST00000475551 OBSCNQ5VST9 7968 aa4.16□□□□□ -1.74
CCM2-207ENST00000475551 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CCM2-207ENST00000475551 KRTAP5-10Q6L8G5 202 aa3.9□□□□□ -1.78
CCM2-207ENST00000475551 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
CCM2-207ENST00000475551 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.8
CCM2-207ENST00000475551 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
CCM2-207ENST00000475551 KRTAP5-8O75690 187 aa3.72□□□□□ -1.81
CCM2-207ENST00000475551 KRTAP5-1Q6L8H4 278 aa3.66□□□□□ -1.82
CCM2-207ENST00000475551 KRTAP5-7Q6L8G8 165 aa3.65□□□□□ -1.83
CCM2-207ENST00000475551 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
CCM2-207ENST00000475551 KRTAP4-2Q9BYR5 136 aa3.45□□□□□ -1.86
CCM2-207ENST00000475551 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
CCM2-207ENST00000475551 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
CCM2-207ENST00000475551 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
CCM2-207ENST00000475551 KRTAP21-1Q3LI58 79 aa3.26□□□□□ -1.89
CCM2-207ENST00000475551 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
CCM2-207ENST00000475551 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
CCM2-207ENST00000475551 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
CCM2-207ENST00000475551 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
CCM2-207ENST00000475551 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
CCM2-207ENST00000475551 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
CCM2-207ENST00000475551 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CCM2-207ENST00000475551 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 112.1 ms