RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 MACF1Q9UPN3 7388 aaKnown RBP5.11□□□□□ -1.59
GGA1-218ENST00000475445 KRTAP9-7A8MTY7 169 aa5.11□□□□□ -1.59
GGA1-218ENST00000475445 MT1EP04732 61 aa5.02□□□□□ -1.61
GGA1-218ENST00000475445 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
GGA1-218ENST00000475445 MT1LQ93083 61 aa5□□□□□ -1.61
GGA1-218ENST00000475445 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
GGA1-218ENST00000475445 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
GGA1-218ENST00000475445 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
GGA1-218ENST00000475445 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
GGA1-218ENST00000475445 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
GGA1-218ENST00000475445 KRTAP2-1Q9BYU5 128 aa4.91□□□□□ -1.62
GGA1-218ENST00000475445 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
GGA1-218ENST00000475445 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
GGA1-218ENST00000475445 NEBP20929 6669 aa4.73□□□□□ -1.65
GGA1-218ENST00000475445 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
GGA1-218ENST00000475445 SPRR2FQ96RM1 72 aa4.72□□□□□ -1.65
GGA1-218ENST00000475445 MT1GP13640 62 aa4.72□□□□□ -1.65
GGA1-218ENST00000475445 MT1MQ8N339 61 aa4.7□□□□□ -1.66
GGA1-218ENST00000475445 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
GGA1-218ENST00000475445 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
GGA1-218ENST00000475445 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
GGA1-218ENST00000475445 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
GGA1-218ENST00000475445 SPRR2EP22531 72 aa4.59□□□□□ -1.67
GGA1-218ENST00000475445 SPRR2BP35325 72 aa4.59□□□□□ -1.67
GGA1-218ENST00000475445 SPRR2AP35326 72 aa4.59□□□□□ -1.67
GGA1-218ENST00000475445 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
GGA1-218ENST00000475445 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
GGA1-218ENST00000475445 KRTAP12-4P60329 112 aa4.52□□□□□ -1.69
GGA1-218ENST00000475445 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
GGA1-218ENST00000475445 KRTAP2-2Q9BYT5 123 aa4.43□□□□□ -1.7
GGA1-218ENST00000475445 SPRR2DP22532 72 aa4.43□□□□□ -1.7
GGA1-218ENST00000475445 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
GGA1-218ENST00000475445 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
GGA1-218ENST00000475445 MT1AP04731 61 aa4.24□□□□□ -1.73
GGA1-218ENST00000475445 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
GGA1-218ENST00000475445 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
GGA1-218ENST00000475445 PRM1P04553 51 aa4.09□□□□□ -1.75
GGA1-218ENST00000475445 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
GGA1-218ENST00000475445 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
GGA1-218ENST00000475445 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
GGA1-218ENST00000475445 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
GGA1-218ENST00000475445 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
GGA1-218ENST00000475445 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
GGA1-218ENST00000475445 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
GGA1-218ENST00000475445 LCE4AQ5TA78 99 aa3.92□□□□□ -1.78
GGA1-218ENST00000475445 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
GGA1-218ENST00000475445 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
GGA1-218ENST00000475445 MT4P47944 62 aa3.86□□□□□ -1.79
GGA1-218ENST00000475445 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
GGA1-218ENST00000475445 MT3P25713 68 aa3.81□□□□□ -1.8
GGA1-218ENST00000475445 OBSCNQ5VST9 7968 aa3.79□□□□□ -1.8
GGA1-218ENST00000475445 KRTAP6-2Q3LI66 62 aa3.79□□□□□ -1.8
GGA1-218ENST00000475445 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
GGA1-218ENST00000475445 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
GGA1-218ENST00000475445 AHNAK2Q8IVF2 5795 aa3.65□□□□□ -1.83
GGA1-218ENST00000475445 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
GGA1-218ENST00000475445 KRTAP5-10Q6L8G5 202 aa3.54□□□□□ -1.84
GGA1-218ENST00000475445 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
GGA1-218ENST00000475445 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
GGA1-218ENST00000475445 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
GGA1-218ENST00000475445 KRTAP4-2Q9BYR5 136 aa3.46□□□□□ -1.86
GGA1-218ENST00000475445 KRTAP5-7Q6L8G8 165 aa3.37□□□□□ -1.87
GGA1-218ENST00000475445 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
GGA1-218ENST00000475445 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
GGA1-218ENST00000475445 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
GGA1-218ENST00000475445 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
GGA1-218ENST00000475445 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
GGA1-218ENST00000475445 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
GGA1-218ENST00000475445 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
GGA1-218ENST00000475445 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
GGA1-218ENST00000475445 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
GGA1-218ENST00000475445 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
GGA1-218ENST00000475445 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
GGA1-218ENST00000475445 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
GGA1-218ENST00000475445 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
GGA1-218ENST00000475445 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
GGA1-218ENST00000475445 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
GGA1-218ENST00000475445 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 14.6 ms