RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
APTX-219ENST00000474658 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
APTX-219ENST00000474658 A6NED7 52 aa3.71□□□□□ -1.82
APTX-219ENST00000474658 MT3P25713 68 aa3.71□□□□□ -1.82
APTX-219ENST00000474658 UQCR11O14957 56 aa3.7□□□□□ -1.82
APTX-219ENST00000474658 SPRR2EP22531 72 aa3.66□□□□□ -1.82
APTX-219ENST00000474658 SPRR2BP35325 72 aa3.66□□□□□ -1.82
APTX-219ENST00000474658 SPRR2AP35326 72 aa3.66□□□□□ -1.82
APTX-219ENST00000474658 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
APTX-219ENST00000474658 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
APTX-219ENST00000474658 CDC42SE1Q9NRR8 79 aa3.64□□□□□ -1.83
APTX-219ENST00000474658 MIR22HGQ0VDD5 57 aa3.63□□□□□ -1.83
APTX-219ENST00000474658 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
APTX-219ENST00000474658 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
APTX-219ENST00000474658 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
APTX-219ENST00000474658 TNP1P09430 55 aa3.57□□□□□ -1.84
APTX-219ENST00000474658 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
APTX-219ENST00000474658 PRO0628Q9UI54 55 aa3.56□□□□□ -1.84
APTX-219ENST00000474658 K7ERS5 55 aa3.53□□□□□ -1.84
APTX-219ENST00000474658 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
APTX-219ENST00000474658 SPRR2DP22532 72 aa3.53□□□□□ -1.84
APTX-219ENST00000474658 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
APTX-219ENST00000474658 MT1EP04732 61 aa3.52□□□□□ -1.85
APTX-219ENST00000474658 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
APTX-219ENST00000474658 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
APTX-219ENST00000474658 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
APTX-219ENST00000474658 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
APTX-219ENST00000474658 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
APTX-219ENST00000474658 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
APTX-219ENST00000474658 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
APTX-219ENST00000474658 DSTQ03001 7570 aaKnown RBP3.42□□□□□ -1.86
APTX-219ENST00000474658 MT1GP13640 62 aa3.4□□□□□ -1.87
APTX-219ENST00000474658 MT1LQ93083 61 aa3.39□□□□□ -1.87
APTX-219ENST00000474658 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
APTX-219ENST00000474658 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
APTX-219ENST00000474658 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
APTX-219ENST00000474658 MT1MQ8N339 61 aa3.35□□□□□ -1.87
APTX-219ENST00000474658 ROMO1P60602 79 aa3.33□□□□□ -1.88
APTX-219ENST00000474658 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
APTX-219ENST00000474658 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
APTX-219ENST00000474658 KRTAP4-3Q9BYR4 195 aa3.28□□□□□ -1.88
APTX-219ENST00000474658 GPR98Q8WXG9 6306 aa3.19□□□□□ -1.9
APTX-219ENST00000474658 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
APTX-219ENST00000474658 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
APTX-219ENST00000474658 MT4P47944 62 aa3.09□□□□□ -1.91
APTX-219ENST00000474658 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
APTX-219ENST00000474658 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
APTX-219ENST00000474658 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
APTX-219ENST00000474658 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
APTX-219ENST00000474658 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
APTX-219ENST00000474658 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
APTX-219ENST00000474658 AHNAK2Q8IVF2 5795 aa2.95□□□□□ -1.94
APTX-219ENST00000474658 KRTAP12-4P60329 112 aa2.92□□□□□ -1.94
APTX-219ENST00000474658 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
APTX-219ENST00000474658 SPRR5A0A1B0GTR4 108 aa2.91□□□□□ -1.94
APTX-219ENST00000474658 MT1AP04731 61 aa2.89□□□□□ -1.95
APTX-219ENST00000474658 KRTAP6-1Q3LI64 71 aa2.87□□□□□ -1.95
APTX-219ENST00000474658 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
APTX-219ENST00000474658 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
APTX-219ENST00000474658 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
APTX-219ENST00000474658 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.98
APTX-219ENST00000474658 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
APTX-219ENST00000474658 LUZP6Q538Z0 58 aa2.68□□□□□ -1.98
APTX-219ENST00000474658 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
APTX-219ENST00000474658 KRTAP5-8O75690 187 aa2.54□□□□□ -2
APTX-219ENST00000474658 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
APTX-219ENST00000474658 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
APTX-219ENST00000474658 AHNAKQ09666 5890 aaKnown RBP2.41□□□□□ -2.02
APTX-219ENST00000474658 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
APTX-219ENST00000474658 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
APTX-219ENST00000474658 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
APTX-219ENST00000474658 INE1O15225 51 aa2.14□□□□□ -2.07
APTX-219ENST00000474658 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
APTX-219ENST00000474658 MUC19Q7Z5P9 8384 aa1.83□□□□□ -2.12
APTX-219ENST00000474658 PRM1P04553 51 aa1.73□□□□□ -2.13
APTX-219ENST00000474658 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
APTX-219ENST00000474658 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
APTX-219ENST00000474658 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 122.4 ms