RNA–Protein interactions for RNA: ENST00000474550.5

NPAS2-208, Transcript of neuronal PAS domain protein 2, humanhuman

TSL 1 (best)

Gene NPAS2, Length 7,983 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2-208ENST00000474550 MT1AP04731 61 aa3.17□□□□□ -1.9
NPAS2-208ENST00000474550 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.9
NPAS2-208ENST00000474550 LCE2AQ5TA79 106 aaPredicted RBP3.15□□□□□ -1.91
NPAS2-208ENST00000474550 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
NPAS2-208ENST00000474550 MT3P25713 68 aa3.08□□□□□ -1.92
NPAS2-208ENST00000474550 LCE2DQ5TA82 110 aaPredicted RBP3.07□□□□□ -1.92
NPAS2-208ENST00000474550 PRM1P04553 51 aa3.04□□□□□ -1.92
NPAS2-208ENST00000474550 KRTAP9-6A8MVA2 160 aa3.04□□□□□ -1.92
NPAS2-208ENST00000474550 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
NPAS2-208ENST00000474550 ABCA13Q86UQ4 5058 aa3□□□□□ -1.93
NPAS2-208ENST00000474550 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
NPAS2-208ENST00000474550 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
NPAS2-208ENST00000474550 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
NPAS2-208ENST00000474550 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
NPAS2-208ENST00000474550 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
NPAS2-208ENST00000474550 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
NPAS2-208ENST00000474550 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
NPAS2-208ENST00000474550 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
NPAS2-208ENST00000474550 MT4P47944 62 aa2.8□□□□□ -1.96
NPAS2-208ENST00000474550 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
NPAS2-208ENST00000474550 LCE1DQ5T752 114 aa2.77□□□□□ -1.97
NPAS2-208ENST00000474550 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
NPAS2-208ENST00000474550 KRTAP9-2Q9BYQ4 174 aa2.74□□□□□ -1.97
NPAS2-208ENST00000474550 UBR4Q5T4S7 5183 aa2.72□□□□□ -1.97
NPAS2-208ENST00000474550 MUC2Q02817 5179 aa2.72□□□□□ -1.97
NPAS2-208ENST00000474550 KRTAP4-9Q9BYQ8 210 aa2.71□□□□□ -1.98
NPAS2-208ENST00000474550 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
NPAS2-208ENST00000474550 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
NPAS2-208ENST00000474550 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
NPAS2-208ENST00000474550 KRTAP5-9P26371 169 aa2.59□□□□□ -1.99
NPAS2-208ENST00000474550 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -2
NPAS2-208ENST00000474550 KRTAP2-2Q9BYT5 123 aa2.56□□□□□ -2
NPAS2-208ENST00000474550 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
NPAS2-208ENST00000474550 SYNE1Q8NF91 8797 aaKnown RBP2.47□□□□□ -2.01
NPAS2-208ENST00000474550 USH2AO75445 5202 aa2.47□□□□□ -2.01
NPAS2-208ENST00000474550 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
NPAS2-208ENST00000474550 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
NPAS2-208ENST00000474550 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
NPAS2-208ENST00000474550 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
NPAS2-208ENST00000474550 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.4□□□□□ -2.02
NPAS2-208ENST00000474550 SYNE2Q8WXH0 6885 aaKnown RBP2.4□□□□□ -2.02
NPAS2-208ENST00000474550 KMT2DO14686 5537 aa2.38□□□□□ -2.03
NPAS2-208ENST00000474550 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
NPAS2-208ENST00000474550 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
NPAS2-208ENST00000474550 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
NPAS2-208ENST00000474550 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
NPAS2-208ENST00000474550 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
NPAS2-208ENST00000474550 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
NPAS2-208ENST00000474550 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
NPAS2-208ENST00000474550 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
NPAS2-208ENST00000474550 KRTAP4-6Q9BYQ5 205 aa2.12□□□□□ -2.07
NPAS2-208ENST00000474550 KRTAP9-9Q9BYP9 154 aa2.12□□□□□ -2.07
NPAS2-208ENST00000474550 MACF1Q9UPN3 7388 aaKnown RBP2.11□□□□□ -2.07
NPAS2-208ENST00000474550 MUC12Q9UKN1 5478 aa2.1□□□□□ -2.07
NPAS2-208ENST00000474550 NEBP20929 6669 aa2.07□□□□□ -2.08
NPAS2-208ENST00000474550 DSTQ03001 7570 aaKnown RBP2.04□□□□□ -2.08
NPAS2-208ENST00000474550 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
NPAS2-208ENST00000474550 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
NPAS2-208ENST00000474550 KRTAP5-3Q6L8H2 238 aa1.91□□□□□ -2.1
NPAS2-208ENST00000474550 KRTAP5-10Q6L8G5 202 aa1.91□□□□□ -2.1
NPAS2-208ENST00000474550 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
NPAS2-208ENST00000474550 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
NPAS2-208ENST00000474550 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
NPAS2-208ENST00000474550 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
NPAS2-208ENST00000474550 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
NPAS2-208ENST00000474550 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
NPAS2-208ENST00000474550 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
NPAS2-208ENST00000474550 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
NPAS2-208ENST00000474550 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
NPAS2-208ENST00000474550 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
NPAS2-208ENST00000474550 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
NPAS2-208ENST00000474550 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
NPAS2-208ENST00000474550 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
NPAS2-208ENST00000474550 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
NPAS2-208ENST00000474550 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
NPAS2-208ENST00000474550 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
NPAS2-208ENST00000474550 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
NPAS2-208ENST00000474550 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 162 ms