RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 KRTAP9-7A8MTY7 169 aa3.17□□□□□ -1.9
CNN3-205ENST00000474409 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
CNN3-205ENST00000474409 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
CNN3-205ENST00000474409 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
CNN3-205ENST00000474409 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
CNN3-205ENST00000474409 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
CNN3-205ENST00000474409 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
CNN3-205ENST00000474409 KRTAP4-11Q9BYQ6 195 aa3.1□□□□□ -1.91
CNN3-205ENST00000474409 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
CNN3-205ENST00000474409 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
CNN3-205ENST00000474409 MT1EP04732 61 aa3.07□□□□□ -1.92
CNN3-205ENST00000474409 KRTAP12-3P60328 96 aa3.07□□□□□ -1.92
CNN3-205ENST00000474409 PRAC1Q96KF2 57 aa3.07□□□□□ -1.92
CNN3-205ENST00000474409 SPRR2EP22531 72 aa3.04□□□□□ -1.92
CNN3-205ENST00000474409 SPRR2BP35325 72 aa3.04□□□□□ -1.92
CNN3-205ENST00000474409 SPRR2AP35326 72 aa3.04□□□□□ -1.92
CNN3-205ENST00000474409 NEBP20929 6669 aa3.01□□□□□ -1.93
CNN3-205ENST00000474409 MDN1Q9NU22 5596 aa3□□□□□ -1.93
CNN3-205ENST00000474409 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
CNN3-205ENST00000474409 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
CNN3-205ENST00000474409 MT1LQ93083 61 aa2.98□□□□□ -1.93
CNN3-205ENST00000474409 KRTAP15-1Q3LI76 137 aa2.96□□□□□ -1.94
CNN3-205ENST00000474409 MT1GP13640 62 aa2.93□□□□□ -1.94
CNN3-205ENST00000474409 SPRR2DP22532 72 aa2.93□□□□□ -1.94
CNN3-205ENST00000474409 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
CNN3-205ENST00000474409 KRTAP19-4Q3LI73 84 aa2.9□□□□□ -1.95
CNN3-205ENST00000474409 MT1MQ8N339 61 aa2.9□□□□□ -1.95
CNN3-205ENST00000474409 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
CNN3-205ENST00000474409 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
CNN3-205ENST00000474409 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
CNN3-205ENST00000474409 DSTQ03001 7570 aaKnown RBP2.8□□□□□ -1.96
CNN3-205ENST00000474409 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
CNN3-205ENST00000474409 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
CNN3-205ENST00000474409 LCE4AQ5TA78 99 aa2.73□□□□□ -1.97
CNN3-205ENST00000474409 KRTAP2-2Q9BYT5 123 aa2.73□□□□□ -1.97
CNN3-205ENST00000474409 KRTAP2-1Q9BYU5 128 aa2.73□□□□□ -1.97
CNN3-205ENST00000474409 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
CNN3-205ENST00000474409 KRTAP9-6A8MVA2 160 aa2.66□□□□□ -1.98
CNN3-205ENST00000474409 KRTAP5-5Q701N2 237 aaPredicted RBP2.61□□□□□ -1.99
CNN3-205ENST00000474409 LUZP6Q538Z0 58 aa2.57□□□□□ -2
CNN3-205ENST00000474409 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
CNN3-205ENST00000474409 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
CNN3-205ENST00000474409 MT1AP04731 61 aa2.55□□□□□ -2
CNN3-205ENST00000474409 MT4P47944 62 aa2.55□□□□□ -2
CNN3-205ENST00000474409 KRTAP6-1Q3LI64 71 aa2.51□□□□□ -2.01
CNN3-205ENST00000474409 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CNN3-205ENST00000474409 NDUFAF8A1L188 74 aa2.44□□□□□ -2.02
CNN3-205ENST00000474409 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
CNN3-205ENST00000474409 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
CNN3-205ENST00000474409 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
CNN3-205ENST00000474409 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
CNN3-205ENST00000474409 MT3P25713 68 aa2.31□□□□□ -2.04
CNN3-205ENST00000474409 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
CNN3-205ENST00000474409 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
CNN3-205ENST00000474409 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
CNN3-205ENST00000474409 OBSCNQ5VST9 7968 aa2.16□□□□□ -2.06
CNN3-205ENST00000474409 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CNN3-205ENST00000474409 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
CNN3-205ENST00000474409 KRTAP5-11Q6L8G4 156 aa2.1□□□□□ -2.07
CNN3-205ENST00000474409 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
CNN3-205ENST00000474409 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
CNN3-205ENST00000474409 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CNN3-205ENST00000474409 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
CNN3-205ENST00000474409 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
CNN3-205ENST00000474409 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
CNN3-205ENST00000474409 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
CNN3-205ENST00000474409 INE1O15225 51 aa1.94□□□□□ -2.1
CNN3-205ENST00000474409 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
CNN3-205ENST00000474409 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
CNN3-205ENST00000474409 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
CNN3-205ENST00000474409 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
CNN3-205ENST00000474409 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
CNN3-205ENST00000474409 PRM1P04553 51 aa1.72□□□□□ -2.13
CNN3-205ENST00000474409 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
CNN3-205ENST00000474409 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
CNN3-205ENST00000474409 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
CNN3-205ENST00000474409 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
CNN3-205ENST00000474409 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 475.5 ms