RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ROMO1P60602 79 aa6.6□□□□□ -1.35
SNRPB-203ENST00000474384 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
SNRPB-203ENST00000474384 KRTAP2-2Q9BYT5 123 aa6.54□□□□□ -1.36
SNRPB-203ENST00000474384 KRTAP2-1Q9BYU5 128 aa6.54□□□□□ -1.36
SNRPB-203ENST00000474384 BRK1Q8WUW1 75 aa6.53□□□□□ -1.36
SNRPB-203ENST00000474384 LCE5AQ5TCM9 118 aa6.52□□□□□ -1.37
SNRPB-203ENST00000474384 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
SNRPB-203ENST00000474384 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
SNRPB-203ENST00000474384 MT1LQ93083 61 aa6.47□□□□□ -1.37
SNRPB-203ENST00000474384 MT1GP13640 62 aa6.46□□□□□ -1.38
SNRPB-203ENST00000474384 GPR98Q8WXG9 6306 aa6.44□□□□□ -1.38
SNRPB-203ENST00000474384 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
SNRPB-203ENST00000474384 PP632Q6XCG6 107 aa6.38□□□□□ -1.39
SNRPB-203ENST00000474384 MT1MQ8N339 61 aa6.36□□□□□ -1.39
SNRPB-203ENST00000474384 DSTQ03001 7570 aaKnown RBP6.26□□□□□ -1.41
SNRPB-203ENST00000474384 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
SNRPB-203ENST00000474384 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
SNRPB-203ENST00000474384 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
SNRPB-203ENST00000474384 PMAIP1Q13794 54 aa6.15□□□□□ -1.42
SNRPB-203ENST00000474384 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
SNRPB-203ENST00000474384 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
SNRPB-203ENST00000474384 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
SNRPB-203ENST00000474384 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
SNRPB-203ENST00000474384 KRTAP4-9Q9BYQ8 210 aa5.87□□□□□ -1.47
SNRPB-203ENST00000474384 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
SNRPB-203ENST00000474384 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
SNRPB-203ENST00000474384 KRTAP5-4Q6L8H1 288 aa5.81□□□□□ -1.48
SNRPB-203ENST00000474384 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
SNRPB-203ENST00000474384 MT4P47944 62 aa5.76□□□□□ -1.49
SNRPB-203ENST00000474384 LCE1DQ5T752 114 aa5.76□□□□□ -1.49
SNRPB-203ENST00000474384 HMCN1Q96RW7 5635 aa5.75□□□□□ -1.49
SNRPB-203ENST00000474384 KRTAP9-6A8MVA2 160 aa5.69□□□□□ -1.5
SNRPB-203ENST00000474384 AHNAK2Q8IVF2 5795 aa5.68□□□□□ -1.5
SNRPB-203ENST00000474384 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
SNRPB-203ENST00000474384 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
SNRPB-203ENST00000474384 KRTAP5-10Q6L8G5 202 aa5.59□□□□□ -1.51
SNRPB-203ENST00000474384 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
SNRPB-203ENST00000474384 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
SNRPB-203ENST00000474384 MT1AP04731 61 aa5.51□□□□□ -1.53
SNRPB-203ENST00000474384 KRTAP5-7Q6L8G8 165 aa5.48□□□□□ -1.53
SNRPB-203ENST00000474384 SPRR5A0A1B0GTR4 108 aa5.47□□□□□ -1.53
SNRPB-203ENST00000474384 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
SNRPB-203ENST00000474384 KRTAP6-1Q3LI64 71 aa5.47□□□□□ -1.53
SNRPB-203ENST00000474384 KRTAP5-3Q6L8H2 238 aa5.31□□□□□ -1.56
SNRPB-203ENST00000474384 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
SNRPB-203ENST00000474384 H3BS24 57 aa5.28□□□□□ -1.56
SNRPB-203ENST00000474384 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
SNRPB-203ENST00000474384 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
SNRPB-203ENST00000474384 A0A0A0MQY5 61 aa5.1□□□□□ -1.59
SNRPB-203ENST00000474384 MT3P25713 68 aa5.02□□□□□ -1.61
SNRPB-203ENST00000474384 AHNAKQ09666 5890 aaKnown RBP4.97□□□□□ -1.61
SNRPB-203ENST00000474384 KRTAP4-11Q9BYQ6 195 aa4.89□□□□□ -1.63
SNRPB-203ENST00000474384 LUZP6Q538Z0 58 aa4.84□□□□□ -1.63
SNRPB-203ENST00000474384 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
SNRPB-203ENST00000474384 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
SNRPB-203ENST00000474384 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
SNRPB-203ENST00000474384 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
SNRPB-203ENST00000474384 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
SNRPB-203ENST00000474384 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
SNRPB-203ENST00000474384 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
SNRPB-203ENST00000474384 LCE3DQ9BYE3 92 aa4.43□□□□□ -1.7
SNRPB-203ENST00000474384 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SNRPB-203ENST00000474384 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
SNRPB-203ENST00000474384 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
SNRPB-203ENST00000474384 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
SNRPB-203ENST00000474384 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
SNRPB-203ENST00000474384 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
SNRPB-203ENST00000474384 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
SNRPB-203ENST00000474384 KRTAP4-12Q9BQ66 201 aa3.72□□□□□ -1.81
SNRPB-203ENST00000474384 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
SNRPB-203ENST00000474384 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
SNRPB-203ENST00000474384 INE1O15225 51 aa3.48□□□□□ -1.85
SNRPB-203ENST00000474384 PRM1P04553 51 aa3.41□□□□□ -1.86
SNRPB-203ENST00000474384 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
SNRPB-203ENST00000474384 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
SNRPB-203ENST00000474384 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SNRPB-203ENST00000474384 KRTAP21-1Q3LI58 79 aa2.54□□□□□ -2
SNRPB-203ENST00000474384 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms