RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 APELAP0DMC3 54 aa2.72□□□□□ -1.97
SMARCE1-208ENST00000474246 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
SMARCE1-208ENST00000474246 S4R3F8 94 aa2.7□□□□□ -1.98
SMARCE1-208ENST00000474246 SPRR1BP22528 89 aa2.69□□□□□ -1.98
SMARCE1-208ENST00000474246 SPINK1P00995 79 aa2.65□□□□□ -1.98
SMARCE1-208ENST00000474246 NOP10Q9NPE3 64 aaKnown RBP2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 SPRR2EP22531 72 aa2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 SPRR2BP35325 72 aa2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 SPRR2AP35326 72 aa2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 RHPN1-AS1Q9BWJ2 59 aa2.62□□□□□ -1.99
SMARCE1-208ENST00000474246 DEFB1P60022 68 aa2.59□□□□□ -1.99
SMARCE1-208ENST00000474246 HTN3P15516 51 aa2.59□□□□□ -2
SMARCE1-208ENST00000474246 DSTQ03001 7570 aaKnown RBP2.58□□□□□ -2
SMARCE1-208ENST00000474246 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
SMARCE1-208ENST00000474246 LCE1EQ5T753 118 aa2.57□□□□□ -2
SMARCE1-208ENST00000474246 SPINK6Q6UWN8 80 aa2.57□□□□□ -2
SMARCE1-208ENST00000474246 SPRR2DP22532 72 aa2.56□□□□□ -2
SMARCE1-208ENST00000474246 A0A0D9SG42 100 aa2.54□□□□□ -2
SMARCE1-208ENST00000474246 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
SMARCE1-208ENST00000474246 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
SMARCE1-208ENST00000474246 HTN1P15515 57 aa2.51□□□□□ -2.01
SMARCE1-208ENST00000474246 KRTAP12-1P59990 96 aa2.51□□□□□ -2.01
SMARCE1-208ENST00000474246 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
SMARCE1-208ENST00000474246 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
SMARCE1-208ENST00000474246 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
SMARCE1-208ENST00000474246 FLGP20930 4061 aaPredicted RBP2.42□□□□□ -2.02
SMARCE1-208ENST00000474246 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
SMARCE1-208ENST00000474246 A0A096LPF7 62 aa2.42□□□□□ -2.02
SMARCE1-208ENST00000474246 H3BNG1 76 aa2.42□□□□□ -2.02
SMARCE1-208ENST00000474246 M0QZ58 72 aa2.4□□□□□ -2.03
SMARCE1-208ENST00000474246 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
SMARCE1-208ENST00000474246 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
SMARCE1-208ENST00000474246 LINC01556Q5JQF7 62 aa2.36□□□□□ -2.03
SMARCE1-208ENST00000474246 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
SMARCE1-208ENST00000474246 MT2AP02795 61 aa2.33□□□□□ -2.04
SMARCE1-208ENST00000474246 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
SMARCE1-208ENST00000474246 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
SMARCE1-208ENST00000474246 KRTAP13-1Q8IUC0 172 aa2.32□□□□□ -2.04
SMARCE1-208ENST00000474246 KRTAP9-6A8MVA2 160 aa2.3□□□□□ -2.04
SMARCE1-208ENST00000474246 A0A096LNI7 61 aa2.29□□□□□ -2.04
SMARCE1-208ENST00000474246 MT1FP04733 61 aa2.29□□□□□ -2.04
SMARCE1-208ENST00000474246 MT4P47944 62 aa2.26□□□□□ -2.05
SMARCE1-208ENST00000474246 TNP1P09430 55 aa2.15□□□□□ -2.07
SMARCE1-208ENST00000474246 KRTAP8-1Q8IUC2 63 aa2.09□□□□□ -2.08
SMARCE1-208ENST00000474246 KRTAP5-8O75690 187 aa2.03□□□□□ -2.08
SMARCE1-208ENST00000474246 C9orf92A6NGG3 77 aa2.02□□□□□ -2.09
SMARCE1-208ENST00000474246 KRTAP12-3P60328 96 aa2.02□□□□□ -2.09
SMARCE1-208ENST00000474246 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
SMARCE1-208ENST00000474246 LCE3AQ5TA76 89 aa1.99□□□□□ -2.09
SMARCE1-208ENST00000474246 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
SMARCE1-208ENST00000474246 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.11
SMARCE1-208ENST00000474246 MT1BP07438 61 aa1.84□□□□□ -2.12
SMARCE1-208ENST00000474246 KRTAP5-5Q701N2 237 aaPredicted RBP1.81□□□□□ -2.12
SMARCE1-208ENST00000474246 SYNE1Q8NF91 8797 aaKnown RBP1.77□□□□□ -2.13
SMARCE1-208ENST00000474246 PRM1P04553 51 aa1.73□□□□□ -2.13
SMARCE1-208ENST00000474246 KRTAP19-8Q3LI54 63 aa1.73□□□□□ -2.13
SMARCE1-208ENST00000474246 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SMARCE1-208ENST00000474246 LCE1CQ5T751 118 aa1.66□□□□□ -2.14
SMARCE1-208ENST00000474246 LCE1BQ5T7P3 118 aa1.66□□□□□ -2.14
SMARCE1-208ENST00000474246 KRTAP19-3Q7Z4W3 81 aa1.62□□□□□ -2.15
SMARCE1-208ENST00000474246 SPRR2GQ9BYE4 73 aa1.58□□□□□ -2.16
SMARCE1-208ENST00000474246 KRTAP19-5Q3LI72 72 aa1.55□□□□□ -2.16
SMARCE1-208ENST00000474246 MT1AP04731 61 aa1.51□□□□□ -2.17
SMARCE1-208ENST00000474246 MT1GP13640 62 aa1.51□□□□□ -2.17
SMARCE1-208ENST00000474246 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
SMARCE1-208ENST00000474246 MT1XP80297 61 aa1.47□□□□□ -2.17
SMARCE1-208ENST00000474246 MT1MQ8N339 61 aa1.4□□□□□ -2.18
SMARCE1-208ENST00000474246 MT1EP04732 61 aa1.4□□□□□ -2.19
SMARCE1-208ENST00000474246 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
SMARCE1-208ENST00000474246 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
SMARCE1-208ENST00000474246 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
SMARCE1-208ENST00000474246 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
SMARCE1-208ENST00000474246 MT1LQ93083 61 aa1.24□□□□□ -2.21
SMARCE1-208ENST00000474246 KRTAP6-1Q3LI64 71 aa1.04□□□□□ -2.24
SMARCE1-208ENST00000474246 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 64.4 ms