RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 A8MU10 97 aa4.16□□□□□ -1.74
CKS1B-206ENST00000474215 MT1EP04732 61 aa4.16□□□□□ -1.74
CKS1B-206ENST00000474215 ATP5EP56381 51 aaPredicted RBP4.14□□□□□ -1.75
CKS1B-206ENST00000474215 KRTAP19-3Q7Z4W3 81 aa4.12□□□□□ -1.75
CKS1B-206ENST00000474215 PRR15LQ9BU68 103 aa4.12□□□□□ -1.75
CKS1B-206ENST00000474215 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
CKS1B-206ENST00000474215 LINC01558Q9Y6Z2 57 aa4.08□□□□□ -1.76
CKS1B-206ENST00000474215 C10orf95Q9H7T3 257 aa4.06□□□□□ -1.76
CKS1B-206ENST00000474215 MT1GP13640 62 aa4.05□□□□□ -1.76
CKS1B-206ENST00000474215 TNP1P09430 55 aa4.04□□□□□ -1.76
CKS1B-206ENST00000474215 TMEM258P61165 79 aa4.03□□□□□ -1.76
CKS1B-206ENST00000474215 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
CKS1B-206ENST00000474215 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
CKS1B-206ENST00000474215 PP632Q6XCG6 107 aa4.01□□□□□ -1.77
CKS1B-206ENST00000474215 UQCR11O14957 56 aa3.99□□□□□ -1.77
CKS1B-206ENST00000474215 MT1LQ93083 61 aa3.98□□□□□ -1.77
CKS1B-206ENST00000474215 MT1MQ8N339 61 aa3.96□□□□□ -1.78
CKS1B-206ENST00000474215 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
CKS1B-206ENST00000474215 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
CKS1B-206ENST00000474215 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
CKS1B-206ENST00000474215 V9GYY9 64 aa3.84□□□□□ -1.79
CKS1B-206ENST00000474215 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
CKS1B-206ENST00000474215 K7ERS5 55 aa3.82□□□□□ -1.8
CKS1B-206ENST00000474215 PSPHP1O15172 72 aa3.82□□□□□ -1.8
CKS1B-206ENST00000474215 RPS28P62857 69 aaKnown RBP3.82□□□□□ -1.8
CKS1B-206ENST00000474215 KRTAP25-1Q3LHN0 102 aa3.82□□□□□ -1.8
CKS1B-206ENST00000474215 Q1T7F1 81 aa3.81□□□□□ -1.8
CKS1B-206ENST00000474215 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
CKS1B-206ENST00000474215 MT4P47944 62 aa3.79□□□□□ -1.8
CKS1B-206ENST00000474215 KRTAP5-4Q6L8H1 288 aa3.77□□□□□ -1.81
CKS1B-206ENST00000474215 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
CKS1B-206ENST00000474215 A6NED7 52 aa3.69□□□□□ -1.82
CKS1B-206ENST00000474215 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
CKS1B-206ENST00000474215 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
CKS1B-206ENST00000474215 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
CKS1B-206ENST00000474215 CDC42SE1Q9NRR8 79 aa3.61□□□□□ -1.83
CKS1B-206ENST00000474215 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
CKS1B-206ENST00000474215 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
CKS1B-206ENST00000474215 ROMO1P60602 79 aa3.56□□□□□ -1.84
CKS1B-206ENST00000474215 KRTAP20-2Q3LI61 65 aa3.56□□□□□ -1.84
CKS1B-206ENST00000474215 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
CKS1B-206ENST00000474215 KRTAP5-10Q6L8G5 202 aa3.55□□□□□ -1.84
CKS1B-206ENST00000474215 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
CKS1B-206ENST00000474215 PRO0628Q9UI54 55 aa3.46□□□□□ -1.86
CKS1B-206ENST00000474215 KRTAP5-7Q6L8G8 165 aa3.42□□□□□ -1.86
CKS1B-206ENST00000474215 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
CKS1B-206ENST00000474215 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
CKS1B-206ENST00000474215 MT1AP04731 61 aa3.38□□□□□ -1.87
CKS1B-206ENST00000474215 KRTAP6-1Q3LI64 71 aa3.37□□□□□ -1.87
CKS1B-206ENST00000474215 SYNE1Q8NF91 8797 aaKnown RBP3.37□□□□□ -1.87
CKS1B-206ENST00000474215 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
CKS1B-206ENST00000474215 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
CKS1B-206ENST00000474215 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
CKS1B-206ENST00000474215 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
CKS1B-206ENST00000474215 KTN1-AS1Q86SY8 53 aa3.19□□□□□ -1.9
CKS1B-206ENST00000474215 MT3P25713 68 aa3.18□□□□□ -1.9
CKS1B-206ENST00000474215 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
CKS1B-206ENST00000474215 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CKS1B-206ENST00000474215 PRAC1Q96KF2 57 aa3.11□□□□□ -1.91
CKS1B-206ENST00000474215 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
CKS1B-206ENST00000474215 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
CKS1B-206ENST00000474215 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
CKS1B-206ENST00000474215 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
CKS1B-206ENST00000474215 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
CKS1B-206ENST00000474215 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
CKS1B-206ENST00000474215 LUZP6Q538Z0 58 aa2.7□□□□□ -1.98
CKS1B-206ENST00000474215 NDUFAF8A1L188 74 aa2.68□□□□□ -1.98
CKS1B-206ENST00000474215 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
CKS1B-206ENST00000474215 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
CKS1B-206ENST00000474215 LCE3DQ9BYE3 92 aa2.58□□□□□ -2
CKS1B-206ENST00000474215 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
CKS1B-206ENST00000474215 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
CKS1B-206ENST00000474215 INE1O15225 51 aa2.14□□□□□ -2.07
CKS1B-206ENST00000474215 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
CKS1B-206ENST00000474215 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CKS1B-206ENST00000474215 PRM1P04553 51 aa1.81□□□□□ -2.12
CKS1B-206ENST00000474215 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
CKS1B-206ENST00000474215 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 126 ms