RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
ABCF3-210ENST00000473311 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
ABCF3-210ENST00000473311 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
ABCF3-210ENST00000473311 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.66
ABCF3-210ENST00000473311 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
ABCF3-210ENST00000473311 LOC100996750A0A140TA64 210 aa4.55□□□□□ -1.68
ABCF3-210ENST00000473311 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
ABCF3-210ENST00000473311 MT1GP13640 62 aa4.51□□□□□ -1.69
ABCF3-210ENST00000473311 FCGBPQ9Y6R7 5405 aaPredicted RBP4.51□□□□□ -1.69
ABCF3-210ENST00000473311 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
ABCF3-210ENST00000473311 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
ABCF3-210ENST00000473311 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
ABCF3-210ENST00000473311 MT1MQ8N339 61 aa4.47□□□□□ -1.69
ABCF3-210ENST00000473311 KRTAP19-3Q7Z4W3 81 aa4.46□□□□□ -1.7
ABCF3-210ENST00000473311 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.36□□□□□ -1.71
ABCF3-210ENST00000473311 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
ABCF3-210ENST00000473311 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
ABCF3-210ENST00000473311 LCE5AQ5TCM9 118 aa4.28□□□□□ -1.72
ABCF3-210ENST00000473311 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
ABCF3-210ENST00000473311 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
ABCF3-210ENST00000473311 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
ABCF3-210ENST00000473311 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
ABCF3-210ENST00000473311 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
ABCF3-210ENST00000473311 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
ABCF3-210ENST00000473311 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
ABCF3-210ENST00000473311 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.76
ABCF3-210ENST00000473311 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
ABCF3-210ENST00000473311 MT1AP04731 61 aa4.06□□□□□ -1.76
ABCF3-210ENST00000473311 PRM1P04553 51 aa4.03□□□□□ -1.76
ABCF3-210ENST00000473311 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
ABCF3-210ENST00000473311 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
ABCF3-210ENST00000473311 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
ABCF3-210ENST00000473311 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
ABCF3-210ENST00000473311 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
ABCF3-210ENST00000473311 KRTAP20-1Q3LI63 56 aa3.87□□□□□ -1.79
ABCF3-210ENST00000473311 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
ABCF3-210ENST00000473311 SPRR2EP22531 72 aa3.86□□□□□ -1.79
ABCF3-210ENST00000473311 SPRR2BP35325 72 aa3.86□□□□□ -1.79
ABCF3-210ENST00000473311 SPRR2AP35326 72 aa3.86□□□□□ -1.79
ABCF3-210ENST00000473311 NEBP20929 6669 aa3.78□□□□□ -1.8
ABCF3-210ENST00000473311 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
ABCF3-210ENST00000473311 LCE1DQ5T752 114 aa3.71□□□□□ -1.82
ABCF3-210ENST00000473311 SPRR2DP22532 72 aa3.69□□□□□ -1.82
ABCF3-210ENST00000473311 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
ABCF3-210ENST00000473311 OBSCNQ5VST9 7968 aa3.67□□□□□ -1.82
ABCF3-210ENST00000473311 MT3P25713 68 aa3.62□□□□□ -1.83
ABCF3-210ENST00000473311 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
ABCF3-210ENST00000473311 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
ABCF3-210ENST00000473311 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
ABCF3-210ENST00000473311 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
ABCF3-210ENST00000473311 MT4P47944 62 aa3.28□□□□□ -1.88
ABCF3-210ENST00000473311 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
ABCF3-210ENST00000473311 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
ABCF3-210ENST00000473311 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
ABCF3-210ENST00000473311 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
ABCF3-210ENST00000473311 MUC5ACP98088 5654 aa3.07□□□□□ -1.92
ABCF3-210ENST00000473311 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
ABCF3-210ENST00000473311 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
ABCF3-210ENST00000473311 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
ABCF3-210ENST00000473311 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
ABCF3-210ENST00000473311 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
ABCF3-210ENST00000473311 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
ABCF3-210ENST00000473311 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
ABCF3-210ENST00000473311 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
ABCF3-210ENST00000473311 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
ABCF3-210ENST00000473311 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
ABCF3-210ENST00000473311 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
ABCF3-210ENST00000473311 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
ABCF3-210ENST00000473311 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
ABCF3-210ENST00000473311 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
ABCF3-210ENST00000473311 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
ABCF3-210ENST00000473311 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.58□□□□□ -2
ABCF3-210ENST00000473311 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
ABCF3-210ENST00000473311 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
ABCF3-210ENST00000473311 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
ABCF3-210ENST00000473311 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
ABCF3-210ENST00000473311 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
ABCF3-210ENST00000473311 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 68.9 ms