RNA–Protein interactions for RNA: ENST00000473287.1

TMCO3-206, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-206ENST00000473287 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
TMCO3-206ENST00000473287 USH2AO75445 5202 aa1.1□□□□□ -2.23
TMCO3-206ENST00000473287 DNAH6Q9C0G6 4158 aa1.09□□□□□ -2.23
TMCO3-206ENST00000473287 DEFB136Q30KP8 78 aa1.09□□□□□ -2.23
TMCO3-206ENST00000473287 PKHD1L1Q86WI1 4243 aa1.09□□□□□ -2.24
TMCO3-206ENST00000473287 DSTQ03001 7570 aaKnown RBP1.09□□□□□ -2.24
TMCO3-206ENST00000473287 VPS13DQ5THJ4 4388 aa1.08□□□□□ -2.24
TMCO3-206ENST00000473287 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
TMCO3-206ENST00000473287 M0QZ58 72 aa1.07□□□□□ -2.24
TMCO3-206ENST00000473287 DNAH3Q8TD57 4116 aa1.05□□□□□ -2.24
TMCO3-206ENST00000473287 A0A096LNI7 61 aa1.05□□□□□ -2.24
TMCO3-206ENST00000473287 SPINK6Q6UWN8 80 aa1.05□□□□□ -2.24
TMCO3-206ENST00000473287 DNAH2Q9P225 4427 aa1.05□□□□□ -2.24
TMCO3-206ENST00000473287 DNAH5Q8TE73 4624 aa1.04□□□□□ -2.24
TMCO3-206ENST00000473287 VPS13BQ7Z7G8 4022 aa1.04□□□□□ -2.24
TMCO3-206ENST00000473287 KRTAP2-3P0C7H8 128 aa1.02□□□□□ -2.25
TMCO3-206ENST00000473287 KRTAP5-10Q6L8G5 202 aa1.02□□□□□ -2.25
TMCO3-206ENST00000473287 KRTAP2-4Q9BYR9 128 aa1.02□□□□□ -2.25
TMCO3-206ENST00000473287 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
TMCO3-206ENST00000473287 MUC5BQ9HC84 5762 aaPredicted RBP1.01□□□□□ -2.25
TMCO3-206ENST00000473287 A0A096LPF7 62 aa1.01□□□□□ -2.25
TMCO3-206ENST00000473287 MDN1Q9NU22 5596 aa1□□□□□ -2.25
TMCO3-206ENST00000473287 DNAH17Q9UFH2 4485 aa0.99□□□□□ -2.25
TMCO3-206ENST00000473287 LPAP08519 4548 aa0.99□□□□□ -2.25
TMCO3-206ENST00000473287 SPART-AS1P0CW21 52 aa0.98□□□□□ -2.25
TMCO3-206ENST00000473287 CD52P31358 61 aa0.98□□□□□ -2.25
TMCO3-206ENST00000473287 Q9Y3F1 56 aa0.97□□□□□ -2.25
TMCO3-206ENST00000473287 TNP1P09430 55 aa0.96□□□□□ -2.26
TMCO3-206ENST00000473287 DEFB135Q30KP9 77 aa0.96□□□□□ -2.26
TMCO3-206ENST00000473287 KRTAP2-1Q9BYU5 128 aa0.95□□□□□ -2.26
TMCO3-206ENST00000473287 TNXBP22105 4242 aa0.94□□□□□ -2.26
TMCO3-206ENST00000473287 LINC01556Q5JQF7 62 aa0.94□□□□□ -2.26
TMCO3-206ENST00000473287 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
TMCO3-206ENST00000473287 H3BNG1 76 aa0.93□□□□□ -2.26
TMCO3-206ENST00000473287 DNAH8Q96JB1 4490 aa0.91□□□□□ -2.26
TMCO3-206ENST00000473287 M0R2T5 61 aa0.91□□□□□ -2.26
TMCO3-206ENST00000473287 KRTAP10-4P60372 401 aaPredicted RBP0.91□□□□□ -2.26
TMCO3-206ENST00000473287 DEFB133Q30KQ1 61 aa0.91□□□□□ -2.26
TMCO3-206ENST00000473287 C9orf92A6NGG3 77 aa0.89□□□□□ -2.27
TMCO3-206ENST00000473287 MUC17Q685J3 4493 aa0.88□□□□□ -2.27
TMCO3-206ENST00000473287 HTN3P15516 51 aa0.87□□□□□ -2.27
TMCO3-206ENST00000473287 SMR3BP02814 79 aaPredicted RBP0.85□□□□□ -2.27
TMCO3-206ENST00000473287 RPS29P62273 56 aaKnown RBP0.84□□□□□ -2.27
TMCO3-206ENST00000473287 DEFB4AO15263 64 aa0.82□□□□□ -2.28
TMCO3-206ENST00000473287 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
TMCO3-206ENST00000473287 KRTAP19-6Q3LI70 58 aa0.81□□□□□ -2.28
TMCO3-206ENST00000473287 PRM1P04553 51 aa0.79□□□□□ -2.28
TMCO3-206ENST00000473287 U3KQA8 63 aa0.79□□□□□ -2.28
TMCO3-206ENST00000473287 SPRR2EP22531 72 aa0.78□□□□□ -2.28
TMCO3-206ENST00000473287 SPRR2BP35325 72 aa0.78□□□□□ -2.28
TMCO3-206ENST00000473287 SPRR2AP35326 72 aa0.78□□□□□ -2.28
TMCO3-206ENST00000473287 FLGP20930 4061 aaPredicted RBP0.78□□□□□ -2.28
TMCO3-206ENST00000473287 SPRR2DP22532 72 aa0.76□□□□□ -2.29
TMCO3-206ENST00000473287 MT4P47944 62 aa0.76□□□□□ -2.29
TMCO3-206ENST00000473287 SYNE1Q8NF91 8797 aaKnown RBP0.72□□□□□ -2.29
TMCO3-206ENST00000473287 MT1HL1P0DM35 61 aa0.69□□□□□ -2.3
TMCO3-206ENST00000473287 KRTAP19-5Q3LI72 72 aa0.69□□□□□ -2.3
TMCO3-206ENST00000473287 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
TMCO3-206ENST00000473287 MT1AP04731 61 aa0.67□□□□□ -2.3
TMCO3-206ENST00000473287 SPRR2FQ96RM1 72 aa0.67□□□□□ -2.3
TMCO3-206ENST00000473287 MT1HP80294 61 aa0.65□□□□□ -2.31
TMCO3-206ENST00000473287 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
TMCO3-206ENST00000473287 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
TMCO3-206ENST00000473287 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
TMCO3-206ENST00000473287 MT1EP04732 61 aa0.56□□□□□ -2.32
TMCO3-206ENST00000473287 SPRR2GQ9BYE4 73 aa0.56□□□□□ -2.32
TMCO3-206ENST00000473287 MT1LQ93083 61 aa0.54□□□□□ -2.32
TMCO3-206ENST00000473287 KRTAP19-2Q3LHN2 52 aa0.51□□□□□ -2.33
TMCO3-206ENST00000473287 KRTAP20-2Q3LI61 65 aa0.5□□□□□ -2.33
TMCO3-206ENST00000473287 MT1XP80297 61 aa0.49□□□□□ -2.33
TMCO3-206ENST00000473287 MT1FP04733 61 aa0.48□□□□□ -2.33
TMCO3-206ENST00000473287 KRTAP19-8Q3LI54 63 aa0.48□□□□□ -2.33
TMCO3-206ENST00000473287 MT2AP02795 61 aa0.47□□□□□ -2.33
TMCO3-206ENST00000473287 MT1GP13640 62 aa0.45□□□□□ -2.34
TMCO3-206ENST00000473287 KRTAP19-7Q3SYF9 63 aa0.44□□□□□ -2.34
TMCO3-206ENST00000473287 MT1BP07438 61 aa0.41□□□□□ -2.34
TMCO3-206ENST00000473287 KRTAP6-1Q3LI64 71 aa0.38□□□□□ -2.35
TMCO3-206ENST00000473287 MT1MQ8N339 61 aa0.36□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 111 ms