RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
IFFO1-208ENST00000472558 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
IFFO1-208ENST00000472558 MACF1Q9UPN3 7388 aaKnown RBP4.71□□□□□ -1.66
IFFO1-208ENST00000472558 MT1LQ93083 61 aa4.68□□□□□ -1.66
IFFO1-208ENST00000472558 SYNE2Q8WXH0 6885 aaKnown RBP4.67□□□□□ -1.66
IFFO1-208ENST00000472558 MUC12Q9UKN1 5478 aa4.64□□□□□ -1.67
IFFO1-208ENST00000472558 MT1EP04732 61 aa4.61□□□□□ -1.67
IFFO1-208ENST00000472558 CRCT1Q9UGL9 99 aa4.59□□□□□ -1.67
IFFO1-208ENST00000472558 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
IFFO1-208ENST00000472558 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
IFFO1-208ENST00000472558 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
IFFO1-208ENST00000472558 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.69
IFFO1-208ENST00000472558 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
IFFO1-208ENST00000472558 MT1GP13640 62 aa4.45□□□□□ -1.7
IFFO1-208ENST00000472558 KRTAP2-2Q9BYT5 123 aa4.41□□□□□ -1.7
IFFO1-208ENST00000472558 SPRR2FQ96RM1 72 aa4.38□□□□□ -1.71
IFFO1-208ENST00000472558 KRTAP9-6A0A140TA67 174 aa4.36□□□□□ -1.71
IFFO1-208ENST00000472558 MT1MQ8N339 61 aa4.29□□□□□ -1.72
IFFO1-208ENST00000472558 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
IFFO1-208ENST00000472558 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
IFFO1-208ENST00000472558 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
IFFO1-208ENST00000472558 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
IFFO1-208ENST00000472558 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
IFFO1-208ENST00000472558 LCE1AQ5T7P2 110 aa4.18□□□□□ -1.74
IFFO1-208ENST00000472558 KRTAP6-3Q3LI67 103 aa4.14□□□□□ -1.75
IFFO1-208ENST00000472558 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
IFFO1-208ENST00000472558 SPRR2EP22531 72 aa4.11□□□□□ -1.75
IFFO1-208ENST00000472558 SPRR2BP35325 72 aa4.11□□□□□ -1.75
IFFO1-208ENST00000472558 SPRR2AP35326 72 aa4.11□□□□□ -1.75
IFFO1-208ENST00000472558 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
IFFO1-208ENST00000472558 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
IFFO1-208ENST00000472558 MT1AP04731 61 aa4.08□□□□□ -1.76
IFFO1-208ENST00000472558 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
IFFO1-208ENST00000472558 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
IFFO1-208ENST00000472558 PRM1P04553 51 aa4.03□□□□□ -1.77
IFFO1-208ENST00000472558 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
IFFO1-208ENST00000472558 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
IFFO1-208ENST00000472558 LCE3EQ5T5B0 92 aa3.98□□□□□ -1.77
IFFO1-208ENST00000472558 NEBP20929 6669 aa3.97□□□□□ -1.77
IFFO1-208ENST00000472558 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
IFFO1-208ENST00000472558 SPRR2DP22532 72 aa3.93□□□□□ -1.78
IFFO1-208ENST00000472558 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
IFFO1-208ENST00000472558 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
IFFO1-208ENST00000472558 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
IFFO1-208ENST00000472558 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
IFFO1-208ENST00000472558 KRTAP4-6Q9BYQ5 205 aa3.58□□□□□ -1.84
IFFO1-208ENST00000472558 MT4P47944 62 aa3.55□□□□□ -1.84
IFFO1-208ENST00000472558 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
IFFO1-208ENST00000472558 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
IFFO1-208ENST00000472558 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
IFFO1-208ENST00000472558 MT3P25713 68 aa3.44□□□□□ -1.86
IFFO1-208ENST00000472558 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
IFFO1-208ENST00000472558 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
IFFO1-208ENST00000472558 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
IFFO1-208ENST00000472558 KRTAP5-3Q6L8H2 238 aa3.15□□□□□ -1.91
IFFO1-208ENST00000472558 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
IFFO1-208ENST00000472558 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
IFFO1-208ENST00000472558 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
IFFO1-208ENST00000472558 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
IFFO1-208ENST00000472558 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
IFFO1-208ENST00000472558 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
IFFO1-208ENST00000472558 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
IFFO1-208ENST00000472558 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
IFFO1-208ENST00000472558 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
IFFO1-208ENST00000472558 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
IFFO1-208ENST00000472558 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
IFFO1-208ENST00000472558 LCE1CQ5T751 118 aa2.67□□□□□ -1.98
IFFO1-208ENST00000472558 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
IFFO1-208ENST00000472558 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
IFFO1-208ENST00000472558 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
IFFO1-208ENST00000472558 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
IFFO1-208ENST00000472558 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
IFFO1-208ENST00000472558 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
IFFO1-208ENST00000472558 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
IFFO1-208ENST00000472558 KRTAP5-11Q6L8G4 156 aa2.25□□□□□ -2.05
IFFO1-208ENST00000472558 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
IFFO1-208ENST00000472558 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
IFFO1-208ENST00000472558 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 71.1 ms