RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 PP632Q6XCG6 107 aa2.02□□□□□ -2.09
TM4SF1-202ENST00000472441 MT1BP07438 61 aa2.02□□□□□ -2.09
TM4SF1-202ENST00000472441 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
TM4SF1-202ENST00000472441 OBSCNQ5VST9 7968 aa2.01□□□□□ -2.09
TM4SF1-202ENST00000472441 KRTAP15-1Q3LI76 137 aa2.01□□□□□ -2.09
TM4SF1-202ENST00000472441 KRTAP10-5P60370 271 aa1.98□□□□□ -2.09
TM4SF1-202ENST00000472441 MT1XP80297 61 aa1.98□□□□□ -2.09
TM4SF1-202ENST00000472441 FCGBPQ9Y6R7 5405 aaPredicted RBP1.97□□□□□ -2.09
TM4SF1-202ENST00000472441 LCE3AQ5TA76 89 aa1.97□□□□□ -2.09
TM4SF1-202ENST00000472441 MACF1Q9UPN3 7388 aaKnown RBP1.96□□□□□ -2.1
TM4SF1-202ENST00000472441 KRTAP23-1A1A580 65 aa1.95□□□□□ -2.1
TM4SF1-202ENST00000472441 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
TM4SF1-202ENST00000472441 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
TM4SF1-202ENST00000472441 KRTAP10-7P60409 375 aaPredicted RBP1.93□□□□□ -2.1
TM4SF1-202ENST00000472441 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
TM4SF1-202ENST00000472441 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
TM4SF1-202ENST00000472441 MDN1Q9NU22 5596 aa1.9□□□□□ -2.1
TM4SF1-202ENST00000472441 SYNE1Q8NF91 8797 aaKnown RBP1.9□□□□□ -2.11
TM4SF1-202ENST00000472441 KRTAP8-1Q8IUC2 63 aa1.88□□□□□ -2.11
TM4SF1-202ENST00000472441 KRTAP19-6Q3LI70 58 aa1.88□□□□□ -2.11
TM4SF1-202ENST00000472441 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
TM4SF1-202ENST00000472441 CRCT1Q9UGL9 99 aa1.86□□□□□ -2.11
TM4SF1-202ENST00000472441 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.12
TM4SF1-202ENST00000472441 SPRR5A0A1B0GTR4 108 aa1.82□□□□□ -2.12
TM4SF1-202ENST00000472441 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
TM4SF1-202ENST00000472441 KRTAP5-1Q6L8H4 278 aa1.81□□□□□ -2.12
TM4SF1-202ENST00000472441 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
TM4SF1-202ENST00000472441 LCE3CQ5T5A8 94 aa1.75□□□□□ -2.13
TM4SF1-202ENST00000472441 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
TM4SF1-202ENST00000472441 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
TM4SF1-202ENST00000472441 KRTAP4-3Q9BYR4 195 aa1.72□□□□□ -2.13
TM4SF1-202ENST00000472441 MT1EP04732 61 aa1.72□□□□□ -2.13
TM4SF1-202ENST00000472441 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
TM4SF1-202ENST00000472441 MT1LQ93083 61 aa1.71□□□□□ -2.14
TM4SF1-202ENST00000472441 SPRR2FQ96RM1 72 aa1.69□□□□□ -2.14
TM4SF1-202ENST00000472441 KRTAP9-6A8MVA2 160 aa1.68□□□□□ -2.14
TM4SF1-202ENST00000472441 INE1O15225 51 aa1.64□□□□□ -2.15
TM4SF1-202ENST00000472441 KRTAP19-3Q7Z4W3 81 aa1.64□□□□□ -2.15
TM4SF1-202ENST00000472441 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
TM4SF1-202ENST00000472441 MT1GP13640 62 aa1.63□□□□□ -2.15
TM4SF1-202ENST00000472441 MT1MQ8N339 61 aa1.62□□□□□ -2.15
TM4SF1-202ENST00000472441 LCE1AQ5T7P2 110 aa1.61□□□□□ -2.15
TM4SF1-202ENST00000472441 NEBP20929 6669 aa1.57□□□□□ -2.16
TM4SF1-202ENST00000472441 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
TM4SF1-202ENST00000472441 KRTAP2-3P0C7H8 128 aa1.55□□□□□ -2.16
TM4SF1-202ENST00000472441 KRTAP2-4Q9BYR9 128 aa1.55□□□□□ -2.16
TM4SF1-202ENST00000472441 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
TM4SF1-202ENST00000472441 SPRR2EP22531 72 aa1.54□□□□□ -2.16
TM4SF1-202ENST00000472441 SPRR2BP35325 72 aa1.54□□□□□ -2.16
TM4SF1-202ENST00000472441 SPRR2AP35326 72 aa1.54□□□□□ -2.16
TM4SF1-202ENST00000472441 KRTAP20-1Q3LI63 56 aa1.53□□□□□ -2.17
TM4SF1-202ENST00000472441 KRTAP2-2Q9BYT5 123 aa1.52□□□□□ -2.17
TM4SF1-202ENST00000472441 SPRR2DP22532 72 aa1.48□□□□□ -2.17
TM4SF1-202ENST00000472441 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
TM4SF1-202ENST00000472441 MT1AP04731 61 aa1.43□□□□□ -2.18
TM4SF1-202ENST00000472441 LCE1FQ5T754 118 aa1.42□□□□□ -2.18
TM4SF1-202ENST00000472441 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
TM4SF1-202ENST00000472441 MT4P47944 62 aa1.4□□□□□ -2.18
TM4SF1-202ENST00000472441 KRTAP12-4P60329 112 aa1.39□□□□□ -2.19
TM4SF1-202ENST00000472441 MT3P25713 68 aa1.37□□□□□ -2.19
TM4SF1-202ENST00000472441 LCE1EQ5T753 118 aa1.35□□□□□ -2.19
TM4SF1-202ENST00000472441 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
TM4SF1-202ENST00000472441 KRTAP6-2Q3LI66 62 aa1.33□□□□□ -2.2
TM4SF1-202ENST00000472441 LCE3EQ5T5B0 92 aa1.31□□□□□ -2.2
TM4SF1-202ENST00000472441 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
TM4SF1-202ENST00000472441 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
TM4SF1-202ENST00000472441 MUC19Q7Z5P9 8384 aa1.28□□□□□ -2.2
TM4SF1-202ENST00000472441 KRTAP20-2Q3LI61 65 aa1.26□□□□□ -2.21
TM4SF1-202ENST00000472441 PRM1P04553 51 aa1.22□□□□□ -2.21
TM4SF1-202ENST00000472441 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
TM4SF1-202ENST00000472441 KRTAP5-10Q6L8G5 202 aa1.21□□□□□ -2.22
TM4SF1-202ENST00000472441 LCE1BQ5T7P3 118 aa1.17□□□□□ -2.22
TM4SF1-202ENST00000472441 LCE1CQ5T751 118 aa1.02□□□□□ -2.25
TM4SF1-202ENST00000472441 KRTAP21-2Q3LI59 83 aa0.93□□□□□ -2.26
TM4SF1-202ENST00000472441 PHGR1C9JFL3 82 aa0.78□□□□□ -2.28
TM4SF1-202ENST00000472441 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
TM4SF1-202ENST00000472441 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 48 ms