RNA–Protein interactions for RNA: ENST00000472413.5

NPIPA1-203, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 5,345 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-203ENST00000472413 MT1MQ8N339 61 aa5.09□□□□□ -1.6
NPIPA1-203ENST00000472413 KRTAP4-7Q9BYR0 210 aa5.05□□□□□ -1.6
NPIPA1-203ENST00000472413 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
NPIPA1-203ENST00000472413 MT3P25713 68 aa4.99□□□□□ -1.61
NPIPA1-203ENST00000472413 RNF213Q63HN8 5207 aa4.96□□□□□ -1.61
NPIPA1-203ENST00000472413 FAT4Q6V0I7 4981 aa4.93□□□□□ -1.62
NPIPA1-203ENST00000472413 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
NPIPA1-203ENST00000472413 MT4P47944 62 aa4.91□□□□□ -1.62
NPIPA1-203ENST00000472413 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
NPIPA1-203ENST00000472413 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
NPIPA1-203ENST00000472413 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
NPIPA1-203ENST00000472413 LOC100996750A0A140TA64 210 aa4.76□□□□□ -1.65
NPIPA1-203ENST00000472413 LCE1AQ5T7P2 110 aa4.76□□□□□ -1.65
NPIPA1-203ENST00000472413 MT1AP04731 61 aa4.75□□□□□ -1.65
NPIPA1-203ENST00000472413 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
NPIPA1-203ENST00000472413 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
NPIPA1-203ENST00000472413 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
NPIPA1-203ENST00000472413 KRTAP9-7A8MTY7 169 aa4.71□□□□□ -1.66
NPIPA1-203ENST00000472413 FSIP2Q5CZC0 6907 aa4.69□□□□□ -1.66
NPIPA1-203ENST00000472413 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
NPIPA1-203ENST00000472413 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
NPIPA1-203ENST00000472413 KRTAP2-1Q9BYU5 128 aa4.64□□□□□ -1.67
NPIPA1-203ENST00000472413 LCE1DQ5T752 114 aa4.63□□□□□ -1.67
NPIPA1-203ENST00000472413 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
NPIPA1-203ENST00000472413 MUC2Q02817 5179 aa4.58□□□□□ -1.68
NPIPA1-203ENST00000472413 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
NPIPA1-203ENST00000472413 PRM1P04553 51 aa4.55□□□□□ -1.68
NPIPA1-203ENST00000472413 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
NPIPA1-203ENST00000472413 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
NPIPA1-203ENST00000472413 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
NPIPA1-203ENST00000472413 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
NPIPA1-203ENST00000472413 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
NPIPA1-203ENST00000472413 KRTAP6-1Q3LI64 71 aa4.35□□□□□ -1.71
NPIPA1-203ENST00000472413 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
NPIPA1-203ENST00000472413 KRTAP4-9Q9BYQ8 210 aa4.33□□□□□ -1.72
NPIPA1-203ENST00000472413 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
NPIPA1-203ENST00000472413 OBSCNQ5VST9 7968 aa4.3□□□□□ -1.72
NPIPA1-203ENST00000472413 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
NPIPA1-203ENST00000472413 USH2AO75445 5202 aa4.1□□□□□ -1.75
NPIPA1-203ENST00000472413 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
NPIPA1-203ENST00000472413 KRTAP5-9P26371 169 aa4.05□□□□□ -1.76
NPIPA1-203ENST00000472413 KMT2DO14686 5537 aa3.95□□□□□ -1.78
NPIPA1-203ENST00000472413 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
NPIPA1-203ENST00000472413 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
NPIPA1-203ENST00000472413 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
NPIPA1-203ENST00000472413 NEBP20929 6669 aa3.92□□□□□ -1.78
NPIPA1-203ENST00000472413 SSPOA2VEC9 5147 aa3.86□□□□□ -1.79
NPIPA1-203ENST00000472413 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
NPIPA1-203ENST00000472413 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.8
NPIPA1-203ENST00000472413 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
NPIPA1-203ENST00000472413 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
NPIPA1-203ENST00000472413 KRTAP4-6Q9BYQ5 205 aa3.69□□□□□ -1.82
NPIPA1-203ENST00000472413 MDN1Q9NU22 5596 aa3.59□□□□□ -1.83
NPIPA1-203ENST00000472413 KRTAP5-4Q6L8H1 288 aa3.53□□□□□ -1.84
NPIPA1-203ENST00000472413 GPR98Q8WXG9 6306 aa3.5□□□□□ -1.85
NPIPA1-203ENST00000472413 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
NPIPA1-203ENST00000472413 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
NPIPA1-203ENST00000472413 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
NPIPA1-203ENST00000472413 KRTAP4-12Q9BQ66 201 aa3.17□□□□□ -1.9
NPIPA1-203ENST00000472413 KRTAP4-2Q9BYR5 136 aa3.17□□□□□ -1.9
NPIPA1-203ENST00000472413 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
NPIPA1-203ENST00000472413 KRTAP5-3Q6L8H2 238 aa3.09□□□□□ -1.92
NPIPA1-203ENST00000472413 AHNAK2Q8IVF2 5795 aa2.97□□□□□ -1.93
NPIPA1-203ENST00000472413 MUC5ACP98088 5654 aa2.93□□□□□ -1.94
NPIPA1-203ENST00000472413 HMCN1Q96RW7 5635 aa2.82□□□□□ -1.96
NPIPA1-203ENST00000472413 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
NPIPA1-203ENST00000472413 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
NPIPA1-203ENST00000472413 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
NPIPA1-203ENST00000472413 MUC5BQ9HC84 5762 aaPredicted RBP2.5□□□□□ -2.01
NPIPA1-203ENST00000472413 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
NPIPA1-203ENST00000472413 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
NPIPA1-203ENST00000472413 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
NPIPA1-203ENST00000472413 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
NPIPA1-203ENST00000472413 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
NPIPA1-203ENST00000472413 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
NPIPA1-203ENST00000472413 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
NPIPA1-203ENST00000472413 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
NPIPA1-203ENST00000472413 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 18.7 ms