RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 MDN1Q9NU22 5596 aa6.14□□□□□ -1.43
CCM2-205ENST00000472223 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
CCM2-205ENST00000472223 KRTAP19-3Q7Z4W3 81 aa6.06□□□□□ -1.44
CCM2-205ENST00000472223 H3BS24 57 aa6.03□□□□□ -1.44
CCM2-205ENST00000472223 MT1GP13640 62 aa6.01□□□□□ -1.45
CCM2-205ENST00000472223 SPRR2DP22532 72 aa6□□□□□ -1.45
CCM2-205ENST00000472223 MT1LQ93083 61 aa6□□□□□ -1.45
CCM2-205ENST00000472223 KRTAP15-1Q3LI76 137 aa5.98□□□□□ -1.45
CCM2-205ENST00000472223 LCE5AQ5TCM9 118 aa5.97□□□□□ -1.45
CCM2-205ENST00000472223 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
CCM2-205ENST00000472223 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
CCM2-205ENST00000472223 PRAC1Q96KF2 57 aa5.93□□□□□ -1.46
CCM2-205ENST00000472223 MT1MQ8N339 61 aa5.86□□□□□ -1.47
CCM2-205ENST00000472223 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
CCM2-205ENST00000472223 KRTAP2-3P0C7H8 128 aa5.84□□□□□ -1.47
CCM2-205ENST00000472223 KRTAP2-4Q9BYR9 128 aa5.84□□□□□ -1.47
CCM2-205ENST00000472223 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
CCM2-205ENST00000472223 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
CCM2-205ENST00000472223 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
CCM2-205ENST00000472223 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
CCM2-205ENST00000472223 KRTAP2-2Q9BYT5 123 aa5.69□□□□□ -1.5
CCM2-205ENST00000472223 KRTAP2-1Q9BYU5 128 aa5.69□□□□□ -1.5
CCM2-205ENST00000472223 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
CCM2-205ENST00000472223 KRTAP4-3Q9BYR4 195 aa5.66□□□□□ -1.5
CCM2-205ENST00000472223 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CCM2-205ENST00000472223 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
CCM2-205ENST00000472223 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
CCM2-205ENST00000472223 KRTAP9-6A8MVA2 160 aa5.29□□□□□ -1.56
CCM2-205ENST00000472223 KRTAP5-5Q701N2 237 aaPredicted RBP5.27□□□□□ -1.57
CCM2-205ENST00000472223 SPRR5A0A1B0GTR4 108 aa5.25□□□□□ -1.57
CCM2-205ENST00000472223 KRTAP5-4Q6L8H1 288 aa5.25□□□□□ -1.57
CCM2-205ENST00000472223 MT4P47944 62 aa5.2□□□□□ -1.58
CCM2-205ENST00000472223 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
CCM2-205ENST00000472223 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
CCM2-205ENST00000472223 MT1AP04731 61 aa5.14□□□□□ -1.59
CCM2-205ENST00000472223 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
CCM2-205ENST00000472223 LUZP6Q538Z0 58 aa5.1□□□□□ -1.59
CCM2-205ENST00000472223 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
CCM2-205ENST00000472223 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
CCM2-205ENST00000472223 SYNE1Q8NF91 8797 aaKnown RBP5.02□□□□□ -1.61
CCM2-205ENST00000472223 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
CCM2-205ENST00000472223 KRTAP20-2Q3LI61 65 aa4.95□□□□□ -1.62
CCM2-205ENST00000472223 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
CCM2-205ENST00000472223 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
CCM2-205ENST00000472223 KRTAP5-3Q6L8H2 238 aa4.74□□□□□ -1.65
CCM2-205ENST00000472223 MT3P25713 68 aa4.73□□□□□ -1.65
CCM2-205ENST00000472223 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
CCM2-205ENST00000472223 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
CCM2-205ENST00000472223 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.67
CCM2-205ENST00000472223 GPR98Q8WXG9 6306 aa4.57□□□□□ -1.68
CCM2-205ENST00000472223 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
CCM2-205ENST00000472223 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
CCM2-205ENST00000472223 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
CCM2-205ENST00000472223 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
CCM2-205ENST00000472223 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
CCM2-205ENST00000472223 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
CCM2-205ENST00000472223 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
CCM2-205ENST00000472223 KRTAP5-8O75690 187 aa4.2□□□□□ -1.74
CCM2-205ENST00000472223 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
CCM2-205ENST00000472223 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
CCM2-205ENST00000472223 LCE3EQ5T5B0 92 aa4.12□□□□□ -1.75
CCM2-205ENST00000472223 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
CCM2-205ENST00000472223 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
CCM2-205ENST00000472223 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
CCM2-205ENST00000472223 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
CCM2-205ENST00000472223 INE1O15225 51 aa3.81□□□□□ -1.8
CCM2-205ENST00000472223 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
CCM2-205ENST00000472223 AHNAKQ09666 5890 aaKnown RBP3.69□□□□□ -1.82
CCM2-205ENST00000472223 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
CCM2-205ENST00000472223 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
CCM2-205ENST00000472223 PRM1P04553 51 aa3.37□□□□□ -1.87
CCM2-205ENST00000472223 KRTAP21-2Q3LI59 83 aa3.29□□□□□ -1.88
CCM2-205ENST00000472223 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CCM2-205ENST00000472223 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CCM2-205ENST00000472223 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CCM2-205ENST00000472223 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
CCM2-205ENST00000472223 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CCM2-205ENST00000472223 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 75.4 ms