RNA–Protein interactions for RNA: ENST00000471234.5

TNPO3-203, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,283 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-203ENST00000471234 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.87
TNPO3-203ENST00000471234 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.88
TNPO3-203ENST00000471234 MUC12Q9UKN1 5478 aa3.32□□□□□ -1.88
TNPO3-203ENST00000471234 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
TNPO3-203ENST00000471234 DSTQ03001 7570 aaKnown RBP3.3□□□□□ -1.88
TNPO3-203ENST00000471234 LCE5AQ5TCM9 118 aa3.27□□□□□ -1.89
TNPO3-203ENST00000471234 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
TNPO3-203ENST00000471234 KRTAP19-7Q3SYF9 63 aa3.24□□□□□ -1.89
TNPO3-203ENST00000471234 MT1EP04732 61 aa3.18□□□□□ -1.9
TNPO3-203ENST00000471234 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
TNPO3-203ENST00000471234 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
TNPO3-203ENST00000471234 MT1LQ93083 61 aa3.14□□□□□ -1.91
TNPO3-203ENST00000471234 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
TNPO3-203ENST00000471234 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
TNPO3-203ENST00000471234 SPRR2EP22531 72 aa3.09□□□□□ -1.92
TNPO3-203ENST00000471234 SPRR2BP35325 72 aa3.09□□□□□ -1.92
TNPO3-203ENST00000471234 SPRR2AP35326 72 aa3.09□□□□□ -1.92
TNPO3-203ENST00000471234 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
TNPO3-203ENST00000471234 KRTAP19-3Q7Z4W3 81 aa3.08□□□□□ -1.92
TNPO3-203ENST00000471234 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
TNPO3-203ENST00000471234 MT1GP13640 62 aa3.06□□□□□ -1.92
TNPO3-203ENST00000471234 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
TNPO3-203ENST00000471234 LOC100996750A0A140TA64 210 aa3.04□□□□□ -1.92
TNPO3-203ENST00000471234 MT1MQ8N339 61 aa3.02□□□□□ -1.93
TNPO3-203ENST00000471234 KRTAP9-6A8MVA2 160 aa2.99□□□□□ -1.93
TNPO3-203ENST00000471234 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
TNPO3-203ENST00000471234 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
TNPO3-203ENST00000471234 SPRR2DP22532 72 aa2.95□□□□□ -1.94
TNPO3-203ENST00000471234 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
TNPO3-203ENST00000471234 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
TNPO3-203ENST00000471234 KRTAP2-3P0C7H8 128 aa2.9□□□□□ -1.95
TNPO3-203ENST00000471234 KRTAP2-4Q9BYR9 128 aa2.9□□□□□ -1.95
TNPO3-203ENST00000471234 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
TNPO3-203ENST00000471234 KRTAP4-6Q9BYQ5 205 aa2.81□□□□□ -1.96
TNPO3-203ENST00000471234 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
TNPO3-203ENST00000471234 NEBP20929 6669 aa2.74□□□□□ -1.97
TNPO3-203ENST00000471234 KRTAP5-5Q701N2 237 aaPredicted RBP2.72□□□□□ -1.97
TNPO3-203ENST00000471234 KRTAP12-4P60329 112 aa2.71□□□□□ -1.98
TNPO3-203ENST00000471234 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
TNPO3-203ENST00000471234 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
TNPO3-203ENST00000471234 MT4P47944 62 aa2.69□□□□□ -1.98
TNPO3-203ENST00000471234 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
TNPO3-203ENST00000471234 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
TNPO3-203ENST00000471234 MT1AP04731 61 aa2.63□□□□□ -1.99
TNPO3-203ENST00000471234 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
TNPO3-203ENST00000471234 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
TNPO3-203ENST00000471234 KRTAP20-1Q3LI63 56 aa2.6□□□□□ -1.99
TNPO3-203ENST00000471234 LCE1DQ5T752 114 aa2.53□□□□□ -2
TNPO3-203ENST00000471234 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
TNPO3-203ENST00000471234 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
TNPO3-203ENST00000471234 MT3P25713 68 aa2.47□□□□□ -2.01
TNPO3-203ENST00000471234 LCE3DQ9BYE3 92 aa2.46□□□□□ -2.02
TNPO3-203ENST00000471234 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TNPO3-203ENST00000471234 PRM1P04553 51 aa2.43□□□□□ -2.02
TNPO3-203ENST00000471234 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
TNPO3-203ENST00000471234 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
TNPO3-203ENST00000471234 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.02
TNPO3-203ENST00000471234 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
TNPO3-203ENST00000471234 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
TNPO3-203ENST00000471234 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
TNPO3-203ENST00000471234 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
TNPO3-203ENST00000471234 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
TNPO3-203ENST00000471234 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
TNPO3-203ENST00000471234 KRTAP5-10Q6L8G5 202 aa2.18□□□□□ -2.06
TNPO3-203ENST00000471234 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
TNPO3-203ENST00000471234 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
TNPO3-203ENST00000471234 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
TNPO3-203ENST00000471234 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
TNPO3-203ENST00000471234 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
TNPO3-203ENST00000471234 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
TNPO3-203ENST00000471234 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
TNPO3-203ENST00000471234 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
TNPO3-203ENST00000471234 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
TNPO3-203ENST00000471234 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
TNPO3-203ENST00000471234 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
TNPO3-203ENST00000471234 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
TNPO3-203ENST00000471234 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 61.4 ms