RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
SND1-209ENST00000470723 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
SND1-209ENST00000470723 ROMO1P60602 79 aa4.68□□□□□ -1.66
SND1-209ENST00000470723 KRTAP23-1A1A580 65 aa4.67□□□□□ -1.66
SND1-209ENST00000470723 MT1EP04732 61 aa4.67□□□□□ -1.66
SND1-209ENST00000470723 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
SND1-209ENST00000470723 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
SND1-209ENST00000470723 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
SND1-209ENST00000470723 LOC100996750A0A140TA64 210 aa4.58□□□□□ -1.68
SND1-209ENST00000470723 KRTAP4-6Q9BYQ5 205 aa4.58□□□□□ -1.68
SND1-209ENST00000470723 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
SND1-209ENST00000470723 KRTAP19-3Q7Z4W3 81 aa4.56□□□□□ -1.68
SND1-209ENST00000470723 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
SND1-209ENST00000470723 MT1GP13640 62 aa4.53□□□□□ -1.68
SND1-209ENST00000470723 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
SND1-209ENST00000470723 MT1LQ93083 61 aa4.51□□□□□ -1.69
SND1-209ENST00000470723 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
SND1-209ENST00000470723 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
SND1-209ENST00000470723 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
SND1-209ENST00000470723 MT1MQ8N339 61 aa4.41□□□□□ -1.7
SND1-209ENST00000470723 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
SND1-209ENST00000470723 KRTAP15-1Q3LI76 137 aa4.38□□□□□ -1.71
SND1-209ENST00000470723 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
SND1-209ENST00000470723 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
SND1-209ENST00000470723 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
SND1-209ENST00000470723 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
SND1-209ENST00000470723 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
SND1-209ENST00000470723 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
SND1-209ENST00000470723 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
SND1-209ENST00000470723 MT4P47944 62 aa4.21□□□□□ -1.74
SND1-209ENST00000470723 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
SND1-209ENST00000470723 AHNAK2Q8IVF2 5795 aa4.15□□□□□ -1.75
SND1-209ENST00000470723 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
SND1-209ENST00000470723 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
SND1-209ENST00000470723 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
SND1-209ENST00000470723 KRTAP5-4Q6L8H1 288 aa4.08□□□□□ -1.76
SND1-209ENST00000470723 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
SND1-209ENST00000470723 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
SND1-209ENST00000470723 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
SND1-209ENST00000470723 A0A0A0MQY5 61 aa4□□□□□ -1.77
SND1-209ENST00000470723 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
SND1-209ENST00000470723 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
SND1-209ENST00000470723 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
SND1-209ENST00000470723 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
SND1-209ENST00000470723 KRTAP9-4Q9BYQ2 154 aa3.86□□□□□ -1.79
SND1-209ENST00000470723 MT1AP04731 61 aa3.85□□□□□ -1.79
SND1-209ENST00000470723 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
SND1-209ENST00000470723 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
SND1-209ENST00000470723 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
SND1-209ENST00000470723 AHNAKQ09666 5890 aaKnown RBP3.63□□□□□ -1.83
SND1-209ENST00000470723 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
SND1-209ENST00000470723 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
SND1-209ENST00000470723 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
SND1-209ENST00000470723 KRTAP6-2Q3LI66 62 aa3.56□□□□□ -1.84
SND1-209ENST00000470723 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
SND1-209ENST00000470723 MT3P25713 68 aa3.52□□□□□ -1.85
SND1-209ENST00000470723 KRTAP5-8O75690 187 aa3.48□□□□□ -1.85
SND1-209ENST00000470723 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
SND1-209ENST00000470723 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
SND1-209ENST00000470723 OBSCNQ5VST9 7968 aa3.27□□□□□ -1.89
SND1-209ENST00000470723 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
SND1-209ENST00000470723 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
SND1-209ENST00000470723 NDUFAF8A1L188 74 aa3.16□□□□□ -1.9
SND1-209ENST00000470723 LCE3DQ9BYE3 92 aa3.11□□□□□ -1.91
SND1-209ENST00000470723 LCE3EQ5T5B0 92 aa2.99□□□□□ -1.93
SND1-209ENST00000470723 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
SND1-209ENST00000470723 LCE1BQ5T7P3 118 aa2.95□□□□□ -1.94
SND1-209ENST00000470723 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
SND1-209ENST00000470723 KRTAP5-11Q6L8G4 156 aa2.63□□□□□ -1.99
SND1-209ENST00000470723 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SND1-209ENST00000470723 INE1O15225 51 aa2.57□□□□□ -2
SND1-209ENST00000470723 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SND1-209ENST00000470723 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
SND1-209ENST00000470723 PRM1P04553 51 aa2.38□□□□□ -2.03
SND1-209ENST00000470723 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
SND1-209ENST00000470723 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SND1-209ENST00000470723 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
SND1-209ENST00000470723 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 156.4 ms