RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 FCGBPQ9Y6R7 5405 aaPredicted RBP3.22□□□□□ -1.89
NHLRC3-203ENST00000470258 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
NHLRC3-203ENST00000470258 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
NHLRC3-203ENST00000470258 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.16□□□□□ -1.9
NHLRC3-203ENST00000470258 MT1LQ93083 61 aa3.14□□□□□ -1.91
NHLRC3-203ENST00000470258 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
NHLRC3-203ENST00000470258 MT1EP04732 61 aa3.08□□□□□ -1.92
NHLRC3-203ENST00000470258 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
NHLRC3-203ENST00000470258 MACF1Q9UPN3 7388 aaKnown RBP3.08□□□□□ -1.92
NHLRC3-203ENST00000470258 MT1GP13640 62 aa3.06□□□□□ -1.92
NHLRC3-203ENST00000470258 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
NHLRC3-203ENST00000470258 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
NHLRC3-203ENST00000470258 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
NHLRC3-203ENST00000470258 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
NHLRC3-203ENST00000470258 SYNE2Q8WXH0 6885 aaKnown RBP2.99□□□□□ -1.93
NHLRC3-203ENST00000470258 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
NHLRC3-203ENST00000470258 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
NHLRC3-203ENST00000470258 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
NHLRC3-203ENST00000470258 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
NHLRC3-203ENST00000470258 LCE3BQ5TA77 95 aa2.95□□□□□ -1.94
NHLRC3-203ENST00000470258 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
NHLRC3-203ENST00000470258 MT1MQ8N339 61 aa2.87□□□□□ -1.95
NHLRC3-203ENST00000470258 PRM1P04553 51 aa2.85□□□□□ -1.95
NHLRC3-203ENST00000470258 NEBP20929 6669 aa2.84□□□□□ -1.95
NHLRC3-203ENST00000470258 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
NHLRC3-203ENST00000470258 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
NHLRC3-203ENST00000470258 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
NHLRC3-203ENST00000470258 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
NHLRC3-203ENST00000470258 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
NHLRC3-203ENST00000470258 LCE1AQ5T7P2 110 aa2.78□□□□□ -1.96
NHLRC3-203ENST00000470258 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
NHLRC3-203ENST00000470258 SPRR2EP22531 72 aa2.76□□□□□ -1.97
NHLRC3-203ENST00000470258 SPRR2BP35325 72 aa2.76□□□□□ -1.97
NHLRC3-203ENST00000470258 SPRR2AP35326 72 aa2.76□□□□□ -1.97
NHLRC3-203ENST00000470258 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
NHLRC3-203ENST00000470258 MT1AP04731 61 aa2.71□□□□□ -1.98
NHLRC3-203ENST00000470258 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
NHLRC3-203ENST00000470258 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
NHLRC3-203ENST00000470258 SPRR2DP22532 72 aa2.67□□□□□ -1.98
NHLRC3-203ENST00000470258 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
NHLRC3-203ENST00000470258 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
NHLRC3-203ENST00000470258 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
NHLRC3-203ENST00000470258 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
NHLRC3-203ENST00000470258 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
NHLRC3-203ENST00000470258 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
NHLRC3-203ENST00000470258 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
NHLRC3-203ENST00000470258 KRTAP9-4Q9BYQ2 154 aa2.41□□□□□ -2.02
NHLRC3-203ENST00000470258 LCE4AQ5TA78 99 aa2.4□□□□□ -2.02
NHLRC3-203ENST00000470258 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
NHLRC3-203ENST00000470258 LCE1DQ5T752 114 aa2.35□□□□□ -2.03
NHLRC3-203ENST00000470258 MT3P25713 68 aa2.34□□□□□ -2.03
NHLRC3-203ENST00000470258 MT4P47944 62 aa2.3□□□□□ -2.04
NHLRC3-203ENST00000470258 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
NHLRC3-203ENST00000470258 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
NHLRC3-203ENST00000470258 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
NHLRC3-203ENST00000470258 KRTAP4-11Q9BYQ6 195 aa2.16□□□□□ -2.06
NHLRC3-203ENST00000470258 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.06
NHLRC3-203ENST00000470258 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
NHLRC3-203ENST00000470258 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
NHLRC3-203ENST00000470258 KRTAP4-2Q9BYR5 136 aa2.09□□□□□ -2.07
NHLRC3-203ENST00000470258 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
NHLRC3-203ENST00000470258 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
NHLRC3-203ENST00000470258 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
NHLRC3-203ENST00000470258 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
NHLRC3-203ENST00000470258 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
NHLRC3-203ENST00000470258 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
NHLRC3-203ENST00000470258 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
NHLRC3-203ENST00000470258 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
NHLRC3-203ENST00000470258 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
NHLRC3-203ENST00000470258 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
NHLRC3-203ENST00000470258 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
NHLRC3-203ENST00000470258 LCE1CQ5T751 118 aa1.72□□□□□ -2.13
NHLRC3-203ENST00000470258 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
NHLRC3-203ENST00000470258 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
NHLRC3-203ENST00000470258 KRTAP5-11Q6L8G4 156 aa1.56□□□□□ -2.16
NHLRC3-203ENST00000470258 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
NHLRC3-203ENST00000470258 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 59.6 ms