RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 KRTAP12-3P60328 96 aa3.81□□□□□ -1.8
SMC1A-206ENST00000470241 KRTAP19-3Q7Z4W3 81 aa3.81□□□□□ -1.8
SMC1A-206ENST00000470241 SPRR2DP22532 72 aa3.79□□□□□ -1.8
SMC1A-206ENST00000470241 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
SMC1A-206ENST00000470241 MT1LQ93083 61 aa3.78□□□□□ -1.8
SMC1A-206ENST00000470241 MT1GP13640 62 aa3.75□□□□□ -1.81
SMC1A-206ENST00000470241 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
SMC1A-206ENST00000470241 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
SMC1A-206ENST00000470241 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
SMC1A-206ENST00000470241 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
SMC1A-206ENST00000470241 MT1MQ8N339 61 aa3.7□□□□□ -1.82
SMC1A-206ENST00000470241 PMAIP1Q13794 54 aa3.68□□□□□ -1.82
SMC1A-206ENST00000470241 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
SMC1A-206ENST00000470241 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
SMC1A-206ENST00000470241 PRO0628Q9UI54 55 aa3.64□□□□□ -1.83
SMC1A-206ENST00000470241 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
SMC1A-206ENST00000470241 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
SMC1A-206ENST00000470241 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
SMC1A-206ENST00000470241 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
SMC1A-206ENST00000470241 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
SMC1A-206ENST00000470241 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
SMC1A-206ENST00000470241 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
SMC1A-206ENST00000470241 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
SMC1A-206ENST00000470241 KTN1-AS1Q86SY8 53 aa3.42□□□□□ -1.86
SMC1A-206ENST00000470241 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
SMC1A-206ENST00000470241 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
SMC1A-206ENST00000470241 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
SMC1A-206ENST00000470241 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
SMC1A-206ENST00000470241 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
SMC1A-206ENST00000470241 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
SMC1A-206ENST00000470241 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
SMC1A-206ENST00000470241 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
SMC1A-206ENST00000470241 MT4P47944 62 aa3.3□□□□□ -1.88
SMC1A-206ENST00000470241 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
SMC1A-206ENST00000470241 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
SMC1A-206ENST00000470241 HMCN1Q96RW7 5635 aa3.24□□□□□ -1.89
SMC1A-206ENST00000470241 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
SMC1A-206ENST00000470241 MT1AP04731 61 aa3.21□□□□□ -1.9
SMC1A-206ENST00000470241 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
SMC1A-206ENST00000470241 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
SMC1A-206ENST00000470241 KRTAP6-1Q3LI64 71 aa3.19□□□□□ -1.9
SMC1A-206ENST00000470241 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
SMC1A-206ENST00000470241 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
SMC1A-206ENST00000470241 KRTAP5-3Q6L8H2 238 aa3.07□□□□□ -1.92
SMC1A-206ENST00000470241 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
SMC1A-206ENST00000470241 GPR98Q8WXG9 6306 aa3.02□□□□□ -1.93
SMC1A-206ENST00000470241 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
SMC1A-206ENST00000470241 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
SMC1A-206ENST00000470241 KRTAP5-10Q6L8G5 202 aa2.94□□□□□ -1.94
SMC1A-206ENST00000470241 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
SMC1A-206ENST00000470241 MT3P25713 68 aa2.92□□□□□ -1.94
SMC1A-206ENST00000470241 LUZP6Q538Z0 58 aa2.87□□□□□ -1.95
SMC1A-206ENST00000470241 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SMC1A-206ENST00000470241 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
SMC1A-206ENST00000470241 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
SMC1A-206ENST00000470241 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
SMC1A-206ENST00000470241 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
SMC1A-206ENST00000470241 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
SMC1A-206ENST00000470241 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
SMC1A-206ENST00000470241 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
SMC1A-206ENST00000470241 H3BS24 57 aa2.58□□□□□ -2
SMC1A-206ENST00000470241 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
SMC1A-206ENST00000470241 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
SMC1A-206ENST00000470241 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
SMC1A-206ENST00000470241 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
SMC1A-206ENST00000470241 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
SMC1A-206ENST00000470241 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.25□□□□□ -2.05
SMC1A-206ENST00000470241 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
SMC1A-206ENST00000470241 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
SMC1A-206ENST00000470241 INE1O15225 51 aa2.11□□□□□ -2.07
SMC1A-206ENST00000470241 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SMC1A-206ENST00000470241 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
SMC1A-206ENST00000470241 PRM1P04553 51 aa2.02□□□□□ -2.09
SMC1A-206ENST00000470241 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
SMC1A-206ENST00000470241 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
SMC1A-206ENST00000470241 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
SMC1A-206ENST00000470241 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
SMC1A-206ENST00000470241 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 110.5 ms