RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 SERP2Q8N6R1 65 aa4.15□□□□□ -1.75
HDAC3-204ENST00000469207 A8MU10 97 aa4.14□□□□□ -1.75
HDAC3-204ENST00000469207 K7ERU9 68 aa4.11□□□□□ -1.75
HDAC3-204ENST00000469207 TNP1P09430 55 aa4.09□□□□□ -1.75
HDAC3-204ENST00000469207 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
HDAC3-204ENST00000469207 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
HDAC3-204ENST00000469207 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
HDAC3-204ENST00000469207 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
HDAC3-204ENST00000469207 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
HDAC3-204ENST00000469207 A0A1B0GU69 56 aa4.01□□□□□ -1.77
HDAC3-204ENST00000469207 SYNE1Q8NF91 8797 aaKnown RBP4.01□□□□□ -1.77
HDAC3-204ENST00000469207 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
HDAC3-204ENST00000469207 H7BZZ5 65 aa3.98□□□□□ -1.77
HDAC3-204ENST00000469207 COX7CP15954 63 aa3.96□□□□□ -1.78
HDAC3-204ENST00000469207 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
HDAC3-204ENST00000469207 V9GYY9 64 aa3.93□□□□□ -1.78
HDAC3-204ENST00000469207 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
HDAC3-204ENST00000469207 H3BS24 57 aa3.86□□□□□ -1.79
HDAC3-204ENST00000469207 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
HDAC3-204ENST00000469207 PRO0628Q9UI54 55 aa3.77□□□□□ -1.81
HDAC3-204ENST00000469207 PRR15LQ9BU68 103 aa3.76□□□□□ -1.81
HDAC3-204ENST00000469207 LINC01558Q9Y6Z2 57 aa3.73□□□□□ -1.81
HDAC3-204ENST00000469207 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
HDAC3-204ENST00000469207 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
HDAC3-204ENST00000469207 KRTAP25-1Q3LHN0 102 aa3.71□□□□□ -1.82
HDAC3-204ENST00000469207 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
HDAC3-204ENST00000469207 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
HDAC3-204ENST00000469207 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
HDAC3-204ENST00000469207 KRTAP15-1Q3LI76 137 aa3.67□□□□□ -1.82
HDAC3-204ENST00000469207 UQCR11O14957 56 aa3.66□□□□□ -1.82
HDAC3-204ENST00000469207 MT1AP04731 61 aa3.66□□□□□ -1.82
HDAC3-204ENST00000469207 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
HDAC3-204ENST00000469207 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
HDAC3-204ENST00000469207 RPS28P62857 69 aaKnown RBP3.65□□□□□ -1.83
HDAC3-204ENST00000469207 AHNAKQ09666 5890 aaKnown RBP3.64□□□□□ -1.83
HDAC3-204ENST00000469207 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
HDAC3-204ENST00000469207 MUC5ACP98088 5654 aa3.61□□□□□ -1.83
HDAC3-204ENST00000469207 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
HDAC3-204ENST00000469207 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
HDAC3-204ENST00000469207 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
HDAC3-204ENST00000469207 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
HDAC3-204ENST00000469207 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
HDAC3-204ENST00000469207 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
HDAC3-204ENST00000469207 ATP5EP56381 51 aaPredicted RBP3.56□□□□□ -1.84
HDAC3-204ENST00000469207 KRTAP9-6A8MVA2 160 aa3.55□□□□□ -1.84
HDAC3-204ENST00000469207 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
HDAC3-204ENST00000469207 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
HDAC3-204ENST00000469207 K7ERS5 55 aa3.49□□□□□ -1.85
HDAC3-204ENST00000469207 PSPHP1O15172 72 aa3.41□□□□□ -1.86
HDAC3-204ENST00000469207 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
HDAC3-204ENST00000469207 TMEM258P61165 79 aa3.4□□□□□ -1.87
HDAC3-204ENST00000469207 MT3P25713 68 aa3.36□□□□□ -1.87
HDAC3-204ENST00000469207 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
HDAC3-204ENST00000469207 Q1T7F1 81 aa3.34□□□□□ -1.87
HDAC3-204ENST00000469207 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
HDAC3-204ENST00000469207 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
HDAC3-204ENST00000469207 ROMO1P60602 79 aa3.26□□□□□ -1.89
HDAC3-204ENST00000469207 A6NED7 52 aa3.23□□□□□ -1.89
HDAC3-204ENST00000469207 PRAC1Q96KF2 57 aa3.18□□□□□ -1.9
HDAC3-204ENST00000469207 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
HDAC3-204ENST00000469207 KRTAP4-2Q9BYR5 136 aa3.1□□□□□ -1.91
HDAC3-204ENST00000469207 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
HDAC3-204ENST00000469207 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
HDAC3-204ENST00000469207 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
HDAC3-204ENST00000469207 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
HDAC3-204ENST00000469207 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
HDAC3-204ENST00000469207 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
HDAC3-204ENST00000469207 LCE3DQ9BYE3 92 aa2.6□□□□□ -1.99
HDAC3-204ENST00000469207 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
HDAC3-204ENST00000469207 PHGR1C9JFL3 82 aa2.53□□□□□ -2
HDAC3-204ENST00000469207 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
HDAC3-204ENST00000469207 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
HDAC3-204ENST00000469207 INE1O15225 51 aa2.34□□□□□ -2.03
HDAC3-204ENST00000469207 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
HDAC3-204ENST00000469207 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
HDAC3-204ENST00000469207 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
HDAC3-204ENST00000469207 PRM1P04553 51 aa1.69□□□□□ -2.14
HDAC3-204ENST00000469207 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 86.4 ms