RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
RUNX1-213ENST00000469087 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.63
RUNX1-213ENST00000469087 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
RUNX1-213ENST00000469087 KRTAP19-7Q3SYF9 63 aa4.78□□□□□ -1.64
RUNX1-213ENST00000469087 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
RUNX1-213ENST00000469087 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
RUNX1-213ENST00000469087 LCE4AQ5TA78 99 aa4.73□□□□□ -1.65
RUNX1-213ENST00000469087 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
RUNX1-213ENST00000469087 KRTAP5-9P26371 169 aa4.7□□□□□ -1.66
RUNX1-213ENST00000469087 MUC12Q9UKN1 5478 aa4.69□□□□□ -1.66
RUNX1-213ENST00000469087 MT1EP04732 61 aa4.69□□□□□ -1.66
RUNX1-213ENST00000469087 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
RUNX1-213ENST00000469087 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
RUNX1-213ENST00000469087 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
RUNX1-213ENST00000469087 MDN1Q9NU22 5596 aa4.59□□□□□ -1.67
RUNX1-213ENST00000469087 MT1LQ93083 61 aa4.58□□□□□ -1.68
RUNX1-213ENST00000469087 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
RUNX1-213ENST00000469087 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
RUNX1-213ENST00000469087 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
RUNX1-213ENST00000469087 LCE1AQ5T7P2 110 aa4.53□□□□□ -1.69
RUNX1-213ENST00000469087 SPRR2EP22531 72 aa4.5□□□□□ -1.69
RUNX1-213ENST00000469087 SPRR2BP35325 72 aa4.5□□□□□ -1.69
RUNX1-213ENST00000469087 SPRR2AP35326 72 aa4.5□□□□□ -1.69
RUNX1-213ENST00000469087 MT1GP13640 62 aa4.49□□□□□ -1.69
RUNX1-213ENST00000469087 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
RUNX1-213ENST00000469087 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
RUNX1-213ENST00000469087 MT1MQ8N339 61 aa4.42□□□□□ -1.7
RUNX1-213ENST00000469087 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
RUNX1-213ENST00000469087 NEBP20929 6669 aa4.36□□□□□ -1.71
RUNX1-213ENST00000469087 SPRR2DP22532 72 aa4.32□□□□□ -1.72
RUNX1-213ENST00000469087 DSTQ03001 7570 aaKnown RBP4.3□□□□□ -1.72
RUNX1-213ENST00000469087 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
RUNX1-213ENST00000469087 NDUFAF8A1L188 74 aa4.25□□□□□ -1.73
RUNX1-213ENST00000469087 KRTAP9-6A8MVA2 160 aa4.22□□□□□ -1.73
RUNX1-213ENST00000469087 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
RUNX1-213ENST00000469087 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
RUNX1-213ENST00000469087 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
RUNX1-213ENST00000469087 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
RUNX1-213ENST00000469087 KRTAP2-1Q9BYU5 128 aa4.03□□□□□ -1.76
RUNX1-213ENST00000469087 LUZP6Q538Z0 58 aa4.02□□□□□ -1.77
RUNX1-213ENST00000469087 KRTAP5-5Q701N2 237 aaPredicted RBP4.02□□□□□ -1.77
RUNX1-213ENST00000469087 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
RUNX1-213ENST00000469087 MT1AP04731 61 aa3.88□□□□□ -1.79
RUNX1-213ENST00000469087 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
RUNX1-213ENST00000469087 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
RUNX1-213ENST00000469087 MT4P47944 62 aa3.78□□□□□ -1.8
RUNX1-213ENST00000469087 KRTAP12-4P60329 112 aa3.74□□□□□ -1.81
RUNX1-213ENST00000469087 HMCN1Q96RW7 5635 aa3.68□□□□□ -1.82
RUNX1-213ENST00000469087 KRTAP20-2Q3LI61 65 aa3.65□□□□□ -1.83
RUNX1-213ENST00000469087 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
RUNX1-213ENST00000469087 INE1O15225 51 aa3.55□□□□□ -1.84
RUNX1-213ENST00000469087 MT3P25713 68 aa3.53□□□□□ -1.84
RUNX1-213ENST00000469087 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
RUNX1-213ENST00000469087 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
RUNX1-213ENST00000469087 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
RUNX1-213ENST00000469087 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
RUNX1-213ENST00000469087 AHNAK2Q8IVF2 5795 aa3.3□□□□□ -1.88
RUNX1-213ENST00000469087 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
RUNX1-213ENST00000469087 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
RUNX1-213ENST00000469087 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
RUNX1-213ENST00000469087 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
RUNX1-213ENST00000469087 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
RUNX1-213ENST00000469087 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
RUNX1-213ENST00000469087 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
RUNX1-213ENST00000469087 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
RUNX1-213ENST00000469087 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
RUNX1-213ENST00000469087 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
RUNX1-213ENST00000469087 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
RUNX1-213ENST00000469087 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
RUNX1-213ENST00000469087 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
RUNX1-213ENST00000469087 PRM1P04553 51 aa2.72□□□□□ -1.97
RUNX1-213ENST00000469087 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
RUNX1-213ENST00000469087 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
RUNX1-213ENST00000469087 KRTAP21-2Q3LI59 83 aa2.54□□□□□ -2
RUNX1-213ENST00000469087 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
RUNX1-213ENST00000469087 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
RUNX1-213ENST00000469087 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
RUNX1-213ENST00000469087 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 1734.6 ms