RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 PSPHP1O15172 72 aa5.01□□□□□ -1.61
ABCF1-204ENST00000468958 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
ABCF1-204ENST00000468958 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
ABCF1-204ENST00000468958 K7ERS5 55 aa4.98□□□□□ -1.61
ABCF1-204ENST00000468958 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
ABCF1-204ENST00000468958 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
ABCF1-204ENST00000468958 A6NED7 52 aa4.93□□□□□ -1.62
ABCF1-204ENST00000468958 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
ABCF1-204ENST00000468958 TNP1P09430 55 aa4.85□□□□□ -1.63
ABCF1-204ENST00000468958 SPRR2DP22532 72 aa4.85□□□□□ -1.63
ABCF1-204ENST00000468958 MT3P25713 68 aa4.8□□□□□ -1.64
ABCF1-204ENST00000468958 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
ABCF1-204ENST00000468958 KRTAP4-7Q9BYR0 210 aa4.79□□□□□ -1.64
ABCF1-204ENST00000468958 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
ABCF1-204ENST00000468958 KRTAP2-1Q9BYU5 128 aa4.79□□□□□ -1.64
ABCF1-204ENST00000468958 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
ABCF1-204ENST00000468958 CDC42SE1Q9NRR8 79 aa4.76□□□□□ -1.65
ABCF1-204ENST00000468958 KRTAP19-7Q3SYF9 63 aa4.75□□□□□ -1.65
ABCF1-204ENST00000468958 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
ABCF1-204ENST00000468958 MT1EP04732 61 aa4.68□□□□□ -1.66
ABCF1-204ENST00000468958 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
ABCF1-204ENST00000468958 KRTAP19-3Q7Z4W3 81 aa4.61□□□□□ -1.67
ABCF1-204ENST00000468958 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
ABCF1-204ENST00000468958 ROMO1P60602 79 aa4.59□□□□□ -1.67
ABCF1-204ENST00000468958 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
ABCF1-204ENST00000468958 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
ABCF1-204ENST00000468958 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
ABCF1-204ENST00000468958 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
ABCF1-204ENST00000468958 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
ABCF1-204ENST00000468958 MT1GP13640 62 aa4.48□□□□□ -1.69
ABCF1-204ENST00000468958 MT1LQ93083 61 aa4.47□□□□□ -1.69
ABCF1-204ENST00000468958 MT1MQ8N339 61 aa4.45□□□□□ -1.7
ABCF1-204ENST00000468958 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
ABCF1-204ENST00000468958 PRO0628Q9UI54 55 aa4.41□□□□□ -1.7
ABCF1-204ENST00000468958 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
ABCF1-204ENST00000468958 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
ABCF1-204ENST00000468958 MT4P47944 62 aa4.27□□□□□ -1.73
ABCF1-204ENST00000468958 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
ABCF1-204ENST00000468958 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
ABCF1-204ENST00000468958 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
ABCF1-204ENST00000468958 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
ABCF1-204ENST00000468958 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
ABCF1-204ENST00000468958 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
ABCF1-204ENST00000468958 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
ABCF1-204ENST00000468958 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
ABCF1-204ENST00000468958 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
ABCF1-204ENST00000468958 KTN1-AS1Q86SY8 53 aa3.97□□□□□ -1.77
ABCF1-204ENST00000468958 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
ABCF1-204ENST00000468958 SPRR5A0A1B0GTR4 108 aa3.94□□□□□ -1.78
ABCF1-204ENST00000468958 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
ABCF1-204ENST00000468958 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
ABCF1-204ENST00000468958 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
ABCF1-204ENST00000468958 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
ABCF1-204ENST00000468958 MT1AP04731 61 aa3.8□□□□□ -1.8
ABCF1-204ENST00000468958 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
ABCF1-204ENST00000468958 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
ABCF1-204ENST00000468958 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
ABCF1-204ENST00000468958 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
ABCF1-204ENST00000468958 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
ABCF1-204ENST00000468958 KRTAP5-8O75690 187 aa3.56□□□□□ -1.84
ABCF1-204ENST00000468958 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
ABCF1-204ENST00000468958 KRTAP5-1Q6L8H4 278 aa3.35□□□□□ -1.87
ABCF1-204ENST00000468958 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
ABCF1-204ENST00000468958 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
ABCF1-204ENST00000468958 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
ABCF1-204ENST00000468958 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
ABCF1-204ENST00000468958 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
ABCF1-204ENST00000468958 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
ABCF1-204ENST00000468958 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
ABCF1-204ENST00000468958 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
ABCF1-204ENST00000468958 INE1O15225 51 aa2.65□□□□□ -1.99
ABCF1-204ENST00000468958 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
ABCF1-204ENST00000468958 PRM1P04553 51 aa2.33□□□□□ -2.04
ABCF1-204ENST00000468958 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
ABCF1-204ENST00000468958 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
ABCF1-204ENST00000468958 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
ABCF1-204ENST00000468958 KRTAP21-1Q3LI58 79 aa1.72□□□□□ -2.13
ABCF1-204ENST00000468958 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 12.8 ms