RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 KRTAP2-1Q9BYU5 128 aa6.73□□□□□ -1.33
RNF6-204ENST00000468480 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
RNF6-204ENST00000468480 GPR98Q8WXG9 6306 aa6.59□□□□□ -1.35
RNF6-204ENST00000468480 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
RNF6-204ENST00000468480 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
RNF6-204ENST00000468480 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
RNF6-204ENST00000468480 SPRR2DP22532 72 aa6.5□□□□□ -1.37
RNF6-204ENST00000468480 LCE3BQ5TA77 95 aa6.49□□□□□ -1.37
RNF6-204ENST00000468480 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
RNF6-204ENST00000468480 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
RNF6-204ENST00000468480 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
RNF6-204ENST00000468480 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
RNF6-204ENST00000468480 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
RNF6-204ENST00000468480 KRTAP9-4Q9BYQ2 154 aa6.36□□□□□ -1.39
RNF6-204ENST00000468480 KRTAP4-8A0A0G2JLE6 195 aa6.35□□□□□ -1.39
RNF6-204ENST00000468480 KRTAP12-3P60328 96 aa6.32□□□□□ -1.4
RNF6-204ENST00000468480 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.4
RNF6-204ENST00000468480 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
RNF6-204ENST00000468480 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
RNF6-204ENST00000468480 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
RNF6-204ENST00000468480 KRTAP19-5Q3LI72 72 aa6.15□□□□□ -1.42
RNF6-204ENST00000468480 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
RNF6-204ENST00000468480 SPRR5A0A1B0GTR4 108 aa6.11□□□□□ -1.43
RNF6-204ENST00000468480 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
RNF6-204ENST00000468480 NDUFAF8A1L188 74 aa6□□□□□ -1.45
RNF6-204ENST00000468480 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
RNF6-204ENST00000468480 HMCN1Q96RW7 5635 aa5.92□□□□□ -1.46
RNF6-204ENST00000468480 MT1EP04732 61 aa5.92□□□□□ -1.46
RNF6-204ENST00000468480 LCE3CQ5T5A8 94 aa5.91□□□□□ -1.46
RNF6-204ENST00000468480 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
RNF6-204ENST00000468480 AHNAK2Q8IVF2 5795 aa5.9□□□□□ -1.47
RNF6-204ENST00000468480 KRTAP5-10Q6L8G5 202 aa5.83□□□□□ -1.48
RNF6-204ENST00000468480 MT1LQ93083 61 aa5.83□□□□□ -1.48
RNF6-204ENST00000468480 LCE5AQ5TCM9 118 aa5.82□□□□□ -1.48
RNF6-204ENST00000468480 MT4P47944 62 aa5.77□□□□□ -1.49
RNF6-204ENST00000468480 MT1GP13640 62 aa5.7□□□□□ -1.5
RNF6-204ENST00000468480 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
RNF6-204ENST00000468480 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
RNF6-204ENST00000468480 KRTAP5-7Q6L8G8 165 aa5.66□□□□□ -1.5
RNF6-204ENST00000468480 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
RNF6-204ENST00000468480 H3BS24 57 aa5.58□□□□□ -1.52
RNF6-204ENST00000468480 MT1MQ8N339 61 aa5.57□□□□□ -1.52
RNF6-204ENST00000468480 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
RNF6-204ENST00000468480 KRTAP5-4Q6L8H1 288 aa5.53□□□□□ -1.52
RNF6-204ENST00000468480 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
RNF6-204ENST00000468480 KRTAP9-6A8MVA2 160 aa5.43□□□□□ -1.54
RNF6-204ENST00000468480 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
RNF6-204ENST00000468480 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
RNF6-204ENST00000468480 INE1O15225 51 aa5.11□□□□□ -1.59
RNF6-204ENST00000468480 KRTAP5-5Q701N2 237 aaPredicted RBP5.04□□□□□ -1.6
RNF6-204ENST00000468480 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
RNF6-204ENST00000468480 MT1AP04731 61 aa5□□□□□ -1.61
RNF6-204ENST00000468480 MUC5ACP98088 5654 aa4.97□□□□□ -1.61
RNF6-204ENST00000468480 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
RNF6-204ENST00000468480 KRTAP12-4P60329 112 aa4.96□□□□□ -1.62
RNF6-204ENST00000468480 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
RNF6-204ENST00000468480 KRTAP6-1Q3LI64 71 aa4.86□□□□□ -1.63
RNF6-204ENST00000468480 KRTAP5-8O75690 187 aa4.83□□□□□ -1.64
RNF6-204ENST00000468480 KRTAP5-2Q701N4 177 aa4.74□□□□□ -1.65
RNF6-204ENST00000468480 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
RNF6-204ENST00000468480 MT3P25713 68 aa4.57□□□□□ -1.68
RNF6-204ENST00000468480 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
RNF6-204ENST00000468480 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
RNF6-204ENST00000468480 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
RNF6-204ENST00000468480 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
RNF6-204ENST00000468480 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
RNF6-204ENST00000468480 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
RNF6-204ENST00000468480 PRM1P04553 51 aa3.86□□□□□ -1.79
RNF6-204ENST00000468480 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
RNF6-204ENST00000468480 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
RNF6-204ENST00000468480 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
RNF6-204ENST00000468480 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
RNF6-204ENST00000468480 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
RNF6-204ENST00000468480 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
RNF6-204ENST00000468480 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
RNF6-204ENST00000468480 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
RNF6-204ENST00000468480 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
RNF6-204ENST00000468480 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 95.6 ms