RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
TSPAN4-211ENST00000468468 MT1EP04732 61 aa5.43□□□□□ -1.54
TSPAN4-211ENST00000468468 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
TSPAN4-211ENST00000468468 LCE5AQ5TCM9 118 aa5.41□□□□□ -1.54
TSPAN4-211ENST00000468468 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.55
TSPAN4-211ENST00000468468 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.55
TSPAN4-211ENST00000468468 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.55
TSPAN4-211ENST00000468468 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
TSPAN4-211ENST00000468468 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
TSPAN4-211ENST00000468468 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
TSPAN4-211ENST00000468468 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
TSPAN4-211ENST00000468468 KRTAP4-3Q9BYR4 195 aa5.16□□□□□ -1.58
TSPAN4-211ENST00000468468 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
TSPAN4-211ENST00000468468 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
TSPAN4-211ENST00000468468 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
TSPAN4-211ENST00000468468 KRTAP19-3Q7Z4W3 81 aa5.13□□□□□ -1.59
TSPAN4-211ENST00000468468 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
TSPAN4-211ENST00000468468 MT1GP13640 62 aa5.1□□□□□ -1.59
TSPAN4-211ENST00000468468 MT1MQ8N339 61 aa5.09□□□□□ -1.6
TSPAN4-211ENST00000468468 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
TSPAN4-211ENST00000468468 KRTAP9-7A8MTY7 169 aa5.04□□□□□ -1.6
TSPAN4-211ENST00000468468 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
TSPAN4-211ENST00000468468 KRTAP6-3Q3LI67 103 aa5.03□□□□□ -1.6
TSPAN4-211ENST00000468468 LCE1FQ5T754 118 aa4.94□□□□□ -1.62
TSPAN4-211ENST00000468468 MDN1Q9NU22 5596 aa4.92□□□□□ -1.62
TSPAN4-211ENST00000468468 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
TSPAN4-211ENST00000468468 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
TSPAN4-211ENST00000468468 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
TSPAN4-211ENST00000468468 KRTAP5-9P26371 169 aa4.84□□□□□ -1.63
TSPAN4-211ENST00000468468 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
TSPAN4-211ENST00000468468 SPRR2EP22531 72 aa4.74□□□□□ -1.65
TSPAN4-211ENST00000468468 SPRR2BP35325 72 aa4.74□□□□□ -1.65
TSPAN4-211ENST00000468468 SPRR2AP35326 72 aa4.74□□□□□ -1.65
TSPAN4-211ENST00000468468 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
TSPAN4-211ENST00000468468 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
TSPAN4-211ENST00000468468 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
TSPAN4-211ENST00000468468 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TSPAN4-211ENST00000468468 MT1AP04731 61 aa4.59□□□□□ -1.67
TSPAN4-211ENST00000468468 SPRR2DP22532 72 aa4.53□□□□□ -1.68
TSPAN4-211ENST00000468468 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
TSPAN4-211ENST00000468468 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
TSPAN4-211ENST00000468468 NEBP20929 6669 aa4.52□□□□□ -1.69
TSPAN4-211ENST00000468468 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
TSPAN4-211ENST00000468468 PRM1P04553 51 aa4.43□□□□□ -1.7
TSPAN4-211ENST00000468468 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
TSPAN4-211ENST00000468468 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
TSPAN4-211ENST00000468468 MT3P25713 68 aa4.35□□□□□ -1.71
TSPAN4-211ENST00000468468 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
TSPAN4-211ENST00000468468 KRTAP6-2Q3LI66 62 aa4.14□□□□□ -1.75
TSPAN4-211ENST00000468468 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
TSPAN4-211ENST00000468468 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
TSPAN4-211ENST00000468468 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
TSPAN4-211ENST00000468468 MT4P47944 62 aa4.02□□□□□ -1.77
TSPAN4-211ENST00000468468 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
TSPAN4-211ENST00000468468 HMCN1Q96RW7 5635 aa3.86□□□□□ -1.79
TSPAN4-211ENST00000468468 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
TSPAN4-211ENST00000468468 KRTAP5-3Q6L8H2 238 aa3.72□□□□□ -1.81
TSPAN4-211ENST00000468468 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
TSPAN4-211ENST00000468468 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
TSPAN4-211ENST00000468468 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
TSPAN4-211ENST00000468468 AHNAK2Q8IVF2 5795 aa3.43□□□□□ -1.86
TSPAN4-211ENST00000468468 MUC5ACP98088 5654 aa3.41□□□□□ -1.86
TSPAN4-211ENST00000468468 LCE1BQ5T7P3 118 aa3.36□□□□□ -1.87
TSPAN4-211ENST00000468468 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
TSPAN4-211ENST00000468468 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
TSPAN4-211ENST00000468468 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
TSPAN4-211ENST00000468468 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
TSPAN4-211ENST00000468468 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
TSPAN4-211ENST00000468468 MUC19Q7Z5P9 8384 aa3.14□□□□□ -1.91
TSPAN4-211ENST00000468468 AHNAKQ09666 5890 aaKnown RBP3.1□□□□□ -1.91
TSPAN4-211ENST00000468468 MUC5BQ9HC84 5762 aaPredicted RBP3.01□□□□□ -1.93
TSPAN4-211ENST00000468468 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
TSPAN4-211ENST00000468468 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
TSPAN4-211ENST00000468468 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
TSPAN4-211ENST00000468468 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
TSPAN4-211ENST00000468468 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
TSPAN4-211ENST00000468468 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
TSPAN4-211ENST00000468468 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 65.9 ms