RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.59
SEC16A-208ENST00000467838 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
SEC16A-208ENST00000467838 KMT2DO14686 5537 aa5.06□□□□□ -1.6
SEC16A-208ENST00000467838 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
SEC16A-208ENST00000467838 MT1LQ93083 61 aa5□□□□□ -1.61
SEC16A-208ENST00000467838 MT1EP04732 61 aa4.98□□□□□ -1.61
SEC16A-208ENST00000467838 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
SEC16A-208ENST00000467838 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
SEC16A-208ENST00000467838 KRTAP9-6A0A140TA67 174 aa4.78□□□□□ -1.64
SEC16A-208ENST00000467838 SYNE2Q8WXH0 6885 aaKnown RBP4.75□□□□□ -1.65
SEC16A-208ENST00000467838 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
SEC16A-208ENST00000467838 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
SEC16A-208ENST00000467838 MT1MQ8N339 61 aa4.64□□□□□ -1.67
SEC16A-208ENST00000467838 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
SEC16A-208ENST00000467838 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
SEC16A-208ENST00000467838 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
SEC16A-208ENST00000467838 MT1GP13640 62 aa4.61□□□□□ -1.67
SEC16A-208ENST00000467838 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
SEC16A-208ENST00000467838 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
SEC16A-208ENST00000467838 LCE3BQ5TA77 95 aa4.52□□□□□ -1.69
SEC16A-208ENST00000467838 MDN1Q9NU22 5596 aa4.51□□□□□ -1.69
SEC16A-208ENST00000467838 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
SEC16A-208ENST00000467838 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
SEC16A-208ENST00000467838 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
SEC16A-208ENST00000467838 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
SEC16A-208ENST00000467838 SPRR2EP22531 72 aa4.42□□□□□ -1.7
SEC16A-208ENST00000467838 SPRR2BP35325 72 aa4.42□□□□□ -1.7
SEC16A-208ENST00000467838 SPRR2AP35326 72 aa4.42□□□□□ -1.7
SEC16A-208ENST00000467838 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
SEC16A-208ENST00000467838 KRTAP9-4Q9BYQ2 154 aa4.42□□□□□ -1.7
SEC16A-208ENST00000467838 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
SEC16A-208ENST00000467838 MT1AP04731 61 aa4.31□□□□□ -1.72
SEC16A-208ENST00000467838 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
SEC16A-208ENST00000467838 NEBP20929 6669 aa4.28□□□□□ -1.72
SEC16A-208ENST00000467838 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
SEC16A-208ENST00000467838 SPRR2DP22532 72 aa4.25□□□□□ -1.73
SEC16A-208ENST00000467838 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
SEC16A-208ENST00000467838 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SEC16A-208ENST00000467838 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
SEC16A-208ENST00000467838 KRTAP5-5Q701N2 237 aaPredicted RBP4.14□□□□□ -1.75
SEC16A-208ENST00000467838 LCE3DQ9BYE3 92 aa4.12□□□□□ -1.75
SEC16A-208ENST00000467838 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
SEC16A-208ENST00000467838 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
SEC16A-208ENST00000467838 KRTAP4-2Q9BYR5 136 aa3.99□□□□□ -1.77
SEC16A-208ENST00000467838 KRTAP4-11Q9BYQ6 195 aa3.97□□□□□ -1.77
SEC16A-208ENST00000467838 PRM1P04553 51 aa3.95□□□□□ -1.78
SEC16A-208ENST00000467838 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
SEC16A-208ENST00000467838 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
SEC16A-208ENST00000467838 KRTAP6-2Q3LI66 62 aa3.82□□□□□ -1.8
SEC16A-208ENST00000467838 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
SEC16A-208ENST00000467838 MT3P25713 68 aa3.75□□□□□ -1.81
SEC16A-208ENST00000467838 MT4P47944 62 aa3.71□□□□□ -1.82
SEC16A-208ENST00000467838 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
SEC16A-208ENST00000467838 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
SEC16A-208ENST00000467838 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
SEC16A-208ENST00000467838 KRTAP5-2Q701N4 177 aa3.46□□□□□ -1.86
SEC16A-208ENST00000467838 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
SEC16A-208ENST00000467838 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
SEC16A-208ENST00000467838 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
SEC16A-208ENST00000467838 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
SEC16A-208ENST00000467838 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
SEC16A-208ENST00000467838 KRTAP5-1Q6L8H4 278 aa3.03□□□□□ -1.92
SEC16A-208ENST00000467838 KRTAP5-8O75690 187 aa3□□□□□ -1.93
SEC16A-208ENST00000467838 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
SEC16A-208ENST00000467838 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
SEC16A-208ENST00000467838 LCE1CQ5T751 118 aa2.9□□□□□ -1.95
SEC16A-208ENST00000467838 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
SEC16A-208ENST00000467838 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
SEC16A-208ENST00000467838 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
SEC16A-208ENST00000467838 KRTAP5-11Q6L8G4 156 aa2.67□□□□□ -1.98
SEC16A-208ENST00000467838 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
SEC16A-208ENST00000467838 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
SEC16A-208ENST00000467838 AHNAKQ09666 5890 aaKnown RBP2.42□□□□□ -2.02
SEC16A-208ENST00000467838 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SEC16A-208ENST00000467838 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
SEC16A-208ENST00000467838 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
SEC16A-208ENST00000467838 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
SEC16A-208ENST00000467838 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 56 ms