RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
NELFA-213ENST00000467661 MT1EP04732 61 aa6.23□□□□□ -1.41
NELFA-213ENST00000467661 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
NELFA-213ENST00000467661 MT1LQ93083 61 aa6.19□□□□□ -1.42
NELFA-213ENST00000467661 KRTAP6-3Q3LI67 103 aa6.15□□□□□ -1.42
NELFA-213ENST00000467661 KRTAP5-9P26371 169 aa6.08□□□□□ -1.44
NELFA-213ENST00000467661 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
NELFA-213ENST00000467661 KRTAP9-6A8MVA2 160 aa6.04□□□□□ -1.44
NELFA-213ENST00000467661 SPRR2FQ96RM1 72 aa5.98□□□□□ -1.45
NELFA-213ENST00000467661 MUC12Q9UKN1 5478 aa5.93□□□□□ -1.46
NELFA-213ENST00000467661 INE1O15225 51 aa5.93□□□□□ -1.46
NELFA-213ENST00000467661 KRTAP19-3Q7Z4W3 81 aa5.91□□□□□ -1.46
NELFA-213ENST00000467661 MT1GP13640 62 aa5.89□□□□□ -1.47
NELFA-213ENST00000467661 MT1MQ8N339 61 aa5.84□□□□□ -1.47
NELFA-213ENST00000467661 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
NELFA-213ENST00000467661 KRTAP2-3P0C7H8 128 aa5.82□□□□□ -1.48
NELFA-213ENST00000467661 KRTAP2-4Q9BYR9 128 aa5.82□□□□□ -1.48
NELFA-213ENST00000467661 KRTAP2-1Q9BYU5 128 aa5.82□□□□□ -1.48
NELFA-213ENST00000467661 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
NELFA-213ENST00000467661 NEBP20929 6669 aa5.79□□□□□ -1.48
NELFA-213ENST00000467661 SPRR2EP22531 72 aa5.78□□□□□ -1.48
NELFA-213ENST00000467661 SPRR2BP35325 72 aa5.78□□□□□ -1.48
NELFA-213ENST00000467661 SPRR2AP35326 72 aa5.78□□□□□ -1.48
NELFA-213ENST00000467661 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
NELFA-213ENST00000467661 LCE5AQ5TCM9 118 aa5.72□□□□□ -1.49
NELFA-213ENST00000467661 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
NELFA-213ENST00000467661 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.51
NELFA-213ENST00000467661 SPRR2DP22532 72 aa5.58□□□□□ -1.52
NELFA-213ENST00000467661 KRTAP20-1Q3LI63 56 aa5.47□□□□□ -1.53
NELFA-213ENST00000467661 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
NELFA-213ENST00000467661 LCE3BQ5TA77 95 aa5.4□□□□□ -1.54
NELFA-213ENST00000467661 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
NELFA-213ENST00000467661 MT1AP04731 61 aa5.25□□□□□ -1.57
NELFA-213ENST00000467661 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
NELFA-213ENST00000467661 KRTAP5-5Q701N2 237 aaPredicted RBP5.2□□□□□ -1.58
NELFA-213ENST00000467661 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
NELFA-213ENST00000467661 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
NELFA-213ENST00000467661 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
NELFA-213ENST00000467661 LCE4AQ5TA78 99 aa4.96□□□□□ -1.62
NELFA-213ENST00000467661 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
NELFA-213ENST00000467661 KRTAP9-4Q9BYQ2 154 aa4.95□□□□□ -1.62
NELFA-213ENST00000467661 LCE3DQ9BYE3 92 aa4.89□□□□□ -1.63
NELFA-213ENST00000467661 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
NELFA-213ENST00000467661 MT4P47944 62 aa4.86□□□□□ -1.63
NELFA-213ENST00000467661 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
NELFA-213ENST00000467661 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
NELFA-213ENST00000467661 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
NELFA-213ENST00000467661 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
NELFA-213ENST00000467661 MT3P25713 68 aa4.75□□□□□ -1.65
NELFA-213ENST00000467661 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
NELFA-213ENST00000467661 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
NELFA-213ENST00000467661 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
NELFA-213ENST00000467661 GPR98Q8WXG9 6306 aa4.45□□□□□ -1.7
NELFA-213ENST00000467661 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
NELFA-213ENST00000467661 PRM1P04553 51 aa4.43□□□□□ -1.7
NELFA-213ENST00000467661 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
NELFA-213ENST00000467661 KRTAP4-2Q9BYR5 136 aa4.38□□□□□ -1.71
NELFA-213ENST00000467661 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
NELFA-213ENST00000467661 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
NELFA-213ENST00000467661 OBSCNQ5VST9 7968 aa4.21□□□□□ -1.74
NELFA-213ENST00000467661 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
NELFA-213ENST00000467661 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
NELFA-213ENST00000467661 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
NELFA-213ENST00000467661 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
NELFA-213ENST00000467661 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
NELFA-213ENST00000467661 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
NELFA-213ENST00000467661 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
NELFA-213ENST00000467661 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
NELFA-213ENST00000467661 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
NELFA-213ENST00000467661 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
NELFA-213ENST00000467661 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
NELFA-213ENST00000467661 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
NELFA-213ENST00000467661 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
NELFA-213ENST00000467661 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
NELFA-213ENST00000467661 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
NELFA-213ENST00000467661 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.96
NELFA-213ENST00000467661 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
NELFA-213ENST00000467661 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 83.3 ms