RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 KRTAP4-8Q9BYQ9 185 aa3.95□□□□□ -1.78
ZC3HC1-204ENST00000467642 NEBP20929 6669 aa3.93□□□□□ -1.78
ZC3HC1-204ENST00000467642 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
ZC3HC1-204ENST00000467642 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
ZC3HC1-204ENST00000467642 SPRR2EP22531 72 aa3.87□□□□□ -1.79
ZC3HC1-204ENST00000467642 SPRR2BP35325 72 aa3.87□□□□□ -1.79
ZC3HC1-204ENST00000467642 SPRR2AP35326 72 aa3.87□□□□□ -1.79
ZC3HC1-204ENST00000467642 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
ZC3HC1-204ENST00000467642 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
ZC3HC1-204ENST00000467642 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
ZC3HC1-204ENST00000467642 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
ZC3HC1-204ENST00000467642 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
ZC3HC1-204ENST00000467642 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
ZC3HC1-204ENST00000467642 SPRR2DP22532 72 aa3.74□□□□□ -1.81
ZC3HC1-204ENST00000467642 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
ZC3HC1-204ENST00000467642 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
ZC3HC1-204ENST00000467642 KRTAP19-7Q3SYF9 63 aa3.69□□□□□ -1.82
ZC3HC1-204ENST00000467642 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
ZC3HC1-204ENST00000467642 MT1EP04732 61 aa3.66□□□□□ -1.82
ZC3HC1-204ENST00000467642 KRTAP2-2Q9BYT5 123 aa3.66□□□□□ -1.82
ZC3HC1-204ENST00000467642 KRTAP2-1Q9BYU5 128 aa3.66□□□□□ -1.82
ZC3HC1-204ENST00000467642 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
ZC3HC1-204ENST00000467642 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
ZC3HC1-204ENST00000467642 LCE3BQ5TA77 95 aa3.64□□□□□ -1.83
ZC3HC1-204ENST00000467642 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
ZC3HC1-204ENST00000467642 DSTQ03001 7570 aaKnown RBP3.55□□□□□ -1.84
ZC3HC1-204ENST00000467642 MT1GP13640 62 aa3.55□□□□□ -1.84
ZC3HC1-204ENST00000467642 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
ZC3HC1-204ENST00000467642 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
ZC3HC1-204ENST00000467642 MT1LQ93083 61 aa3.51□□□□□ -1.85
ZC3HC1-204ENST00000467642 LCE3CQ5T5A8 94 aa3.49□□□□□ -1.85
ZC3HC1-204ENST00000467642 MT1MQ8N339 61 aa3.47□□□□□ -1.85
ZC3HC1-204ENST00000467642 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
ZC3HC1-204ENST00000467642 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
ZC3HC1-204ENST00000467642 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
ZC3HC1-204ENST00000467642 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
ZC3HC1-204ENST00000467642 KRTAP4-12Q9BQ66 201 aa3.34□□□□□ -1.88
ZC3HC1-204ENST00000467642 MT4P47944 62 aa3.28□□□□□ -1.88
ZC3HC1-204ENST00000467642 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
ZC3HC1-204ENST00000467642 KRTAP5-4Q6L8H1 288 aa3.24□□□□□ -1.89
ZC3HC1-204ENST00000467642 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
ZC3HC1-204ENST00000467642 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ZC3HC1-204ENST00000467642 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
ZC3HC1-204ENST00000467642 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
ZC3HC1-204ENST00000467642 GPR98Q8WXG9 6306 aa3.09□□□□□ -1.91
ZC3HC1-204ENST00000467642 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
ZC3HC1-204ENST00000467642 MT3P25713 68 aa3.05□□□□□ -1.92
ZC3HC1-204ENST00000467642 SYNE1Q8NF91 8797 aaKnown RBP3.04□□□□□ -1.92
ZC3HC1-204ENST00000467642 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
ZC3HC1-204ENST00000467642 MT1AP04731 61 aa2.98□□□□□ -1.93
ZC3HC1-204ENST00000467642 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
ZC3HC1-204ENST00000467642 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
ZC3HC1-204ENST00000467642 KRTAP5-3Q6L8H2 238 aa2.96□□□□□ -1.94
ZC3HC1-204ENST00000467642 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
ZC3HC1-204ENST00000467642 KRTAP5-7Q6L8G8 165 aa2.85□□□□□ -1.95
ZC3HC1-204ENST00000467642 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
ZC3HC1-204ENST00000467642 KRTAP4-11Q9BYQ6 195 aa2.79□□□□□ -1.96
ZC3HC1-204ENST00000467642 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
ZC3HC1-204ENST00000467642 OBSCNQ5VST9 7968 aa2.74□□□□□ -1.97
ZC3HC1-204ENST00000467642 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
ZC3HC1-204ENST00000467642 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
ZC3HC1-204ENST00000467642 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
ZC3HC1-204ENST00000467642 PRM1P04553 51 aa2.67□□□□□ -1.98
ZC3HC1-204ENST00000467642 LCE1EQ5T753 118 aa2.56□□□□□ -2
ZC3HC1-204ENST00000467642 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
ZC3HC1-204ENST00000467642 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
ZC3HC1-204ENST00000467642 MUC5ACP98088 5654 aa2.45□□□□□ -2.02
ZC3HC1-204ENST00000467642 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
ZC3HC1-204ENST00000467642 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
ZC3HC1-204ENST00000467642 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
ZC3HC1-204ENST00000467642 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
ZC3HC1-204ENST00000467642 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
ZC3HC1-204ENST00000467642 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
ZC3HC1-204ENST00000467642 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
ZC3HC1-204ENST00000467642 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
ZC3HC1-204ENST00000467642 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.13
ZC3HC1-204ENST00000467642 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
ZC3HC1-204ENST00000467642 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 88.1 ms