RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 MT1FP04733 61 aa3.93□□□□□ -1.78
APTX-214ENST00000467331 M0R2T5 61 aa3.91□□□□□ -1.78
APTX-214ENST00000467331 KRTAP10-10P60014 251 aa3.89□□□□□ -1.79
APTX-214ENST00000467331 MT1BP07438 61 aa3.86□□□□□ -1.79
APTX-214ENST00000467331 KRTAP10-5P60370 271 aa3.85□□□□□ -1.79
APTX-214ENST00000467331 MT1XP80297 61 aa3.85□□□□□ -1.79
APTX-214ENST00000467331 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
APTX-214ENST00000467331 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
APTX-214ENST00000467331 INE1O15225 51 aa3.79□□□□□ -1.8
APTX-214ENST00000467331 PRO2289Q9P1D8 64 aa3.77□□□□□ -1.81
APTX-214ENST00000467331 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
APTX-214ENST00000467331 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
APTX-214ENST00000467331 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
APTX-214ENST00000467331 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
APTX-214ENST00000467331 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
APTX-214ENST00000467331 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
APTX-214ENST00000467331 KRTAP19-5Q3LI72 72 aa3.58□□□□□ -1.84
APTX-214ENST00000467331 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
APTX-214ENST00000467331 USH2AO75445 5202 aa3.5□□□□□ -1.85
APTX-214ENST00000467331 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
APTX-214ENST00000467331 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
APTX-214ENST00000467331 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
APTX-214ENST00000467331 KRTAP2-1Q9BYU5 128 aa3.43□□□□□ -1.86
APTX-214ENST00000467331 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
APTX-214ENST00000467331 KRTAP2-2Q9BYT5 123 aa3.38□□□□□ -1.87
APTX-214ENST00000467331 MT1LQ93083 61 aa3.35□□□□□ -1.87
APTX-214ENST00000467331 MT1EP04732 61 aa3.34□□□□□ -1.88
APTX-214ENST00000467331 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
APTX-214ENST00000467331 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
APTX-214ENST00000467331 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
APTX-214ENST00000467331 KMT2DO14686 5537 aa3.23□□□□□ -1.89
APTX-214ENST00000467331 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
APTX-214ENST00000467331 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
APTX-214ENST00000467331 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
APTX-214ENST00000467331 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
APTX-214ENST00000467331 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
APTX-214ENST00000467331 MT1GP13640 62 aa3.11□□□□□ -1.91
APTX-214ENST00000467331 MT1MQ8N339 61 aa3.1□□□□□ -1.91
APTX-214ENST00000467331 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
APTX-214ENST00000467331 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.91
APTX-214ENST00000467331 KRTAP4-3Q9BYR4 195 aa3.05□□□□□ -1.92
APTX-214ENST00000467331 MT3P25713 68 aa3.02□□□□□ -1.93
APTX-214ENST00000467331 MDN1Q9NU22 5596 aa3□□□□□ -1.93
APTX-214ENST00000467331 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
APTX-214ENST00000467331 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
APTX-214ENST00000467331 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
APTX-214ENST00000467331 MT1AP04731 61 aa2.93□□□□□ -1.94
APTX-214ENST00000467331 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
APTX-214ENST00000467331 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
APTX-214ENST00000467331 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
APTX-214ENST00000467331 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
APTX-214ENST00000467331 SPRR2EP22531 72 aa2.82□□□□□ -1.96
APTX-214ENST00000467331 SPRR2BP35325 72 aa2.82□□□□□ -1.96
APTX-214ENST00000467331 SPRR2AP35326 72 aa2.82□□□□□ -1.96
APTX-214ENST00000467331 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
APTX-214ENST00000467331 KRTAP6-1Q3LI64 71 aa2.8□□□□□ -1.96
APTX-214ENST00000467331 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
APTX-214ENST00000467331 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
APTX-214ENST00000467331 SPRR2DP22532 72 aa2.77□□□□□ -1.97
APTX-214ENST00000467331 LCE3DQ9BYE3 92 aa2.77□□□□□ -1.97
APTX-214ENST00000467331 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
APTX-214ENST00000467331 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
APTX-214ENST00000467331 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
APTX-214ENST00000467331 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
APTX-214ENST00000467331 PRM1P04553 51 aa2.63□□□□□ -1.99
APTX-214ENST00000467331 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
APTX-214ENST00000467331 MT4P47944 62 aa2.42□□□□□ -2.02
APTX-214ENST00000467331 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
APTX-214ENST00000467331 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
APTX-214ENST00000467331 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
APTX-214ENST00000467331 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
APTX-214ENST00000467331 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
APTX-214ENST00000467331 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
APTX-214ENST00000467331 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
APTX-214ENST00000467331 KRTAP21-2Q3LI59 83 aa1.84□□□□□ -2.12
APTX-214ENST00000467331 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
APTX-214ENST00000467331 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
APTX-214ENST00000467331 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 13.7 ms