RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 KRTAP19-3Q7Z4W3 81 aa4.03□□□□□ -1.76
MSH5-212ENST00000467319 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
MSH5-212ENST00000467319 CDC42SE1Q9NRR8 79 aa3.97□□□□□ -1.77
MSH5-212ENST00000467319 MT1LQ93083 61 aa3.96□□□□□ -1.78
MSH5-212ENST00000467319 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
MSH5-212ENST00000467319 MT1GP13640 62 aa3.94□□□□□ -1.78
MSH5-212ENST00000467319 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
MSH5-212ENST00000467319 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
MSH5-212ENST00000467319 KRTAP12-3P60328 96 aa3.92□□□□□ -1.78
MSH5-212ENST00000467319 MT1MQ8N339 61 aa3.9□□□□□ -1.79
MSH5-212ENST00000467319 DSTQ03001 7570 aaKnown RBP3.89□□□□□ -1.79
MSH5-212ENST00000467319 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
MSH5-212ENST00000467319 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
MSH5-212ENST00000467319 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
MSH5-212ENST00000467319 ROMO1P60602 79 aa3.86□□□□□ -1.79
MSH5-212ENST00000467319 PMAIP1Q13794 54 aa3.81□□□□□ -1.8
MSH5-212ENST00000467319 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
MSH5-212ENST00000467319 KRTAP4-3Q9BYR4 195 aa3.78□□□□□ -1.8
MSH5-212ENST00000467319 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
MSH5-212ENST00000467319 KRTAP19-4Q3LI73 84 aa3.72□□□□□ -1.81
MSH5-212ENST00000467319 KRTAP15-1Q3LI76 137 aa3.72□□□□□ -1.81
MSH5-212ENST00000467319 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
MSH5-212ENST00000467319 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
MSH5-212ENST00000467319 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
MSH5-212ENST00000467319 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
MSH5-212ENST00000467319 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
MSH5-212ENST00000467319 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
MSH5-212ENST00000467319 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
MSH5-212ENST00000467319 LCE1DQ5T752 114 aa3.59□□□□□ -1.83
MSH5-212ENST00000467319 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
MSH5-212ENST00000467319 MT4P47944 62 aa3.53□□□□□ -1.84
MSH5-212ENST00000467319 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
MSH5-212ENST00000467319 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
MSH5-212ENST00000467319 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
MSH5-212ENST00000467319 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
MSH5-212ENST00000467319 PRAC1Q96KF2 57 aa3.41□□□□□ -1.86
MSH5-212ENST00000467319 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
MSH5-212ENST00000467319 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
MSH5-212ENST00000467319 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
MSH5-212ENST00000467319 MT1AP04731 61 aa3.37□□□□□ -1.87
MSH5-212ENST00000467319 KRTAP5-7Q6L8G8 165 aa3.36□□□□□ -1.87
MSH5-212ENST00000467319 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
MSH5-212ENST00000467319 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
MSH5-212ENST00000467319 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
MSH5-212ENST00000467319 H3BS24 57 aa3.24□□□□□ -1.89
MSH5-212ENST00000467319 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
MSH5-212ENST00000467319 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
MSH5-212ENST00000467319 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
MSH5-212ENST00000467319 MT3P25713 68 aa3.05□□□□□ -1.92
MSH5-212ENST00000467319 KRTAP4-11Q9BYQ6 195 aa3.05□□□□□ -1.92
MSH5-212ENST00000467319 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
MSH5-212ENST00000467319 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
MSH5-212ENST00000467319 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
MSH5-212ENST00000467319 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
MSH5-212ENST00000467319 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
MSH5-212ENST00000467319 KRTAP5-1Q6L8H4 278 aa2.85□□□□□ -1.95
MSH5-212ENST00000467319 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
MSH5-212ENST00000467319 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
MSH5-212ENST00000467319 KRTAP4-12Q9BQ66 201 aa2.78□□□□□ -1.96
MSH5-212ENST00000467319 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
MSH5-212ENST00000467319 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
MSH5-212ENST00000467319 A0A0A0MQY5 61 aa2.67□□□□□ -1.98
MSH5-212ENST00000467319 KRTAP4-2Q9BYR5 136 aa2.64□□□□□ -1.99
MSH5-212ENST00000467319 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
MSH5-212ENST00000467319 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
MSH5-212ENST00000467319 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
MSH5-212ENST00000467319 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
MSH5-212ENST00000467319 INE1O15225 51 aa2.49□□□□□ -2.01
MSH5-212ENST00000467319 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
MSH5-212ENST00000467319 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
MSH5-212ENST00000467319 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
MSH5-212ENST00000467319 LCE1FQ5T754 118 aa2.21□□□□□ -2.06
MSH5-212ENST00000467319 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
MSH5-212ENST00000467319 PRM1P04553 51 aa1.98□□□□□ -2.09
MSH5-212ENST00000467319 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
MSH5-212ENST00000467319 MUC19Q7Z5P9 8384 aa1.82□□□□□ -2.12
MSH5-212ENST00000467319 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
MSH5-212ENST00000467319 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms