RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 FCGBPQ9Y6R7 5405 aaPredicted RBP5.18□□□□□ -1.58
PRPF38B-204ENST00000467302 MT1EP04732 61 aa5.14□□□□□ -1.59
PRPF38B-204ENST00000467302 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
PRPF38B-204ENST00000467302 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
PRPF38B-204ENST00000467302 LCE3BQ5TA77 95 aa5.09□□□□□ -1.59
PRPF38B-204ENST00000467302 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.6
PRPF38B-204ENST00000467302 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.6
PRPF38B-204ENST00000467302 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.6
PRPF38B-204ENST00000467302 MT1LQ93083 61 aa5.07□□□□□ -1.6
PRPF38B-204ENST00000467302 KRTAP9-9Q9BYP9 154 aa5.05□□□□□ -1.6
PRPF38B-204ENST00000467302 KRTAP9-4Q9BYQ2 154 aa5.05□□□□□ -1.6
PRPF38B-204ENST00000467302 KRTAP4-12Q9BQ66 201 aa4.96□□□□□ -1.62
PRPF38B-204ENST00000467302 CRCT1Q9UGL9 99 aa4.95□□□□□ -1.62
PRPF38B-204ENST00000467302 MACF1Q9UPN3 7388 aaKnown RBP4.93□□□□□ -1.62
PRPF38B-204ENST00000467302 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
PRPF38B-204ENST00000467302 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
PRPF38B-204ENST00000467302 MUC12Q9UKN1 5478 aa4.86□□□□□ -1.63
PRPF38B-204ENST00000467302 MT1GP13640 62 aa4.86□□□□□ -1.63
PRPF38B-204ENST00000467302 MT1MQ8N339 61 aa4.83□□□□□ -1.64
PRPF38B-204ENST00000467302 SYNE2Q8WXH0 6885 aaKnown RBP4.77□□□□□ -1.65
PRPF38B-204ENST00000467302 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
PRPF38B-204ENST00000467302 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
PRPF38B-204ENST00000467302 LCE1DQ5T752 114 aa4.77□□□□□ -1.65
PRPF38B-204ENST00000467302 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
PRPF38B-204ENST00000467302 KRTAP5-9P26371 169 aa4.74□□□□□ -1.65
PRPF38B-204ENST00000467302 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
PRPF38B-204ENST00000467302 KRTAP5-3Q6L8H2 238 aa4.66□□□□□ -1.66
PRPF38B-204ENST00000467302 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
PRPF38B-204ENST00000467302 LCE1AQ5T7P2 110 aa4.62□□□□□ -1.67
PRPF38B-204ENST00000467302 SPRR2EP22531 72 aa4.56□□□□□ -1.68
PRPF38B-204ENST00000467302 SPRR2BP35325 72 aa4.56□□□□□ -1.68
PRPF38B-204ENST00000467302 SPRR2AP35326 72 aa4.56□□□□□ -1.68
PRPF38B-204ENST00000467302 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
PRPF38B-204ENST00000467302 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
PRPF38B-204ENST00000467302 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
PRPF38B-204ENST00000467302 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
PRPF38B-204ENST00000467302 SPRR2DP22532 72 aa4.39□□□□□ -1.71
PRPF38B-204ENST00000467302 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
PRPF38B-204ENST00000467302 KRTAP5-5Q701N2 237 aaPredicted RBP4.33□□□□□ -1.72
PRPF38B-204ENST00000467302 MT1AP04731 61 aa4.31□□□□□ -1.72
PRPF38B-204ENST00000467302 NEBP20929 6669 aa4.3□□□□□ -1.72
PRPF38B-204ENST00000467302 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
PRPF38B-204ENST00000467302 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
PRPF38B-204ENST00000467302 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
PRPF38B-204ENST00000467302 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
PRPF38B-204ENST00000467302 KRTAP5-4Q6L8H1 288 aa4.02□□□□□ -1.77
PRPF38B-204ENST00000467302 LCE4AQ5TA78 99 aa4□□□□□ -1.77
PRPF38B-204ENST00000467302 PRM1P04553 51 aa3.95□□□□□ -1.78
PRPF38B-204ENST00000467302 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
PRPF38B-204ENST00000467302 MT3P25713 68 aa3.89□□□□□ -1.79
PRPF38B-204ENST00000467302 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
PRPF38B-204ENST00000467302 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
PRPF38B-204ENST00000467302 MT4P47944 62 aa3.8□□□□□ -1.8
PRPF38B-204ENST00000467302 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
PRPF38B-204ENST00000467302 HMCN1Q96RW7 5635 aa3.7□□□□□ -1.82
PRPF38B-204ENST00000467302 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
PRPF38B-204ENST00000467302 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
PRPF38B-204ENST00000467302 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
PRPF38B-204ENST00000467302 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
PRPF38B-204ENST00000467302 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
PRPF38B-204ENST00000467302 MUC5ACP98088 5654 aa3.24□□□□□ -1.89
PRPF38B-204ENST00000467302 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
PRPF38B-204ENST00000467302 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
PRPF38B-204ENST00000467302 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
PRPF38B-204ENST00000467302 KRTAP5-10Q6L8G5 202 aa3.14□□□□□ -1.91
PRPF38B-204ENST00000467302 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
PRPF38B-204ENST00000467302 KRTAP5-8O75690 187 aa3.06□□□□□ -1.92
PRPF38B-204ENST00000467302 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
PRPF38B-204ENST00000467302 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
PRPF38B-204ENST00000467302 MUC5BQ9HC84 5762 aaPredicted RBP2.95□□□□□ -1.94
PRPF38B-204ENST00000467302 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
PRPF38B-204ENST00000467302 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
PRPF38B-204ENST00000467302 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
PRPF38B-204ENST00000467302 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
PRPF38B-204ENST00000467302 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
PRPF38B-204ENST00000467302 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
PRPF38B-204ENST00000467302 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
PRPF38B-204ENST00000467302 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms