RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 KRTAP19-6Q3LI70 58 aa4.3□□□□□ -1.72
PDZRN3-205ENST00000466780 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
PDZRN3-205ENST00000466780 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
PDZRN3-205ENST00000466780 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
PDZRN3-205ENST00000466780 MUC12Q9UKN1 5478 aa4.18□□□□□ -1.74
PDZRN3-205ENST00000466780 MT1GP13640 62 aa4.17□□□□□ -1.74
PDZRN3-205ENST00000466780 MT1MQ8N339 61 aa4.11□□□□□ -1.75
PDZRN3-205ENST00000466780 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
PDZRN3-205ENST00000466780 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
PDZRN3-205ENST00000466780 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
PDZRN3-205ENST00000466780 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
PDZRN3-205ENST00000466780 SPRR2FQ96RM1 72 aa4.01□□□□□ -1.77
PDZRN3-205ENST00000466780 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
PDZRN3-205ENST00000466780 LCE5AQ5TCM9 118 aa3.92□□□□□ -1.78
PDZRN3-205ENST00000466780 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
PDZRN3-205ENST00000466780 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
PDZRN3-205ENST00000466780 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.8
PDZRN3-205ENST00000466780 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
PDZRN3-205ENST00000466780 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
PDZRN3-205ENST00000466780 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
PDZRN3-205ENST00000466780 MT1AP04731 61 aa3.79□□□□□ -1.8
PDZRN3-205ENST00000466780 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
PDZRN3-205ENST00000466780 KRTAP9-6A0A140TA67 174 aa3.77□□□□□ -1.81
PDZRN3-205ENST00000466780 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
PDZRN3-205ENST00000466780 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
PDZRN3-205ENST00000466780 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
PDZRN3-205ENST00000466780 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
PDZRN3-205ENST00000466780 KRTAP9-7A8MTY7 169 aa3.66□□□□□ -1.82
PDZRN3-205ENST00000466780 SPRR2EP22531 72 aa3.65□□□□□ -1.83
PDZRN3-205ENST00000466780 SPRR2BP35325 72 aa3.65□□□□□ -1.83
PDZRN3-205ENST00000466780 SPRR2AP35326 72 aa3.65□□□□□ -1.83
PDZRN3-205ENST00000466780 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
PDZRN3-205ENST00000466780 PRM1P04553 51 aa3.61□□□□□ -1.83
PDZRN3-205ENST00000466780 SPRR2DP22532 72 aa3.49□□□□□ -1.85
PDZRN3-205ENST00000466780 KRTAP9-4Q9BYQ2 154 aa3.48□□□□□ -1.85
PDZRN3-205ENST00000466780 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
PDZRN3-205ENST00000466780 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
PDZRN3-205ENST00000466780 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
PDZRN3-205ENST00000466780 KRTAP6-3Q3LI67 103 aa3.37□□□□□ -1.87
PDZRN3-205ENST00000466780 MT3P25713 68 aa3.3□□□□□ -1.88
PDZRN3-205ENST00000466780 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
PDZRN3-205ENST00000466780 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
PDZRN3-205ENST00000466780 NEBP20929 6669 aa3.13□□□□□ -1.91
PDZRN3-205ENST00000466780 MT4P47944 62 aa3.11□□□□□ -1.91
PDZRN3-205ENST00000466780 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
PDZRN3-205ENST00000466780 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
PDZRN3-205ENST00000466780 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
PDZRN3-205ENST00000466780 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
PDZRN3-205ENST00000466780 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
PDZRN3-205ENST00000466780 KRTAP20-1Q3LI63 56 aa2.9□□□□□ -1.95
PDZRN3-205ENST00000466780 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
PDZRN3-205ENST00000466780 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
PDZRN3-205ENST00000466780 KRTAP5-3Q6L8H2 238 aa2.82□□□□□ -1.96
PDZRN3-205ENST00000466780 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
PDZRN3-205ENST00000466780 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
PDZRN3-205ENST00000466780 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
PDZRN3-205ENST00000466780 KRTAP5-10Q6L8G5 202 aa2.71□□□□□ -1.98
PDZRN3-205ENST00000466780 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.98
PDZRN3-205ENST00000466780 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
PDZRN3-205ENST00000466780 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
PDZRN3-205ENST00000466780 KRTAP9-9Q9BYP9 154 aa2.59□□□□□ -2
PDZRN3-205ENST00000466780 KRTAP4-2Q9BYR5 136 aa2.55□□□□□ -2
PDZRN3-205ENST00000466780 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
PDZRN3-205ENST00000466780 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
PDZRN3-205ENST00000466780 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.4□□□□□ -2.03
PDZRN3-205ENST00000466780 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
PDZRN3-205ENST00000466780 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
PDZRN3-205ENST00000466780 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
PDZRN3-205ENST00000466780 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.04
PDZRN3-205ENST00000466780 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
PDZRN3-205ENST00000466780 KRTAP5-7Q6L8G8 165 aa2.27□□□□□ -2.05
PDZRN3-205ENST00000466780 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
PDZRN3-205ENST00000466780 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
PDZRN3-205ENST00000466780 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
PDZRN3-205ENST00000466780 AHNAKQ09666 5890 aaKnown RBP2□□□□□ -2.09
PDZRN3-205ENST00000466780 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
PDZRN3-205ENST00000466780 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 54.4 ms