RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
UFD1-206ENST00000466373 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
UFD1-206ENST00000466373 LOC100996750A0A140TA64 210 aa3.47□□□□□ -1.85
UFD1-206ENST00000466373 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
UFD1-206ENST00000466373 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
UFD1-206ENST00000466373 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
UFD1-206ENST00000466373 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
UFD1-206ENST00000466373 MT1GP13640 62 aa3.43□□□□□ -1.86
UFD1-206ENST00000466373 MACF1Q9UPN3 7388 aaKnown RBP3.43□□□□□ -1.86
UFD1-206ENST00000466373 CRCT1Q9UGL9 99 aa3.42□□□□□ -1.86
UFD1-206ENST00000466373 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
UFD1-206ENST00000466373 MT1MQ8N339 61 aa3.39□□□□□ -1.87
UFD1-206ENST00000466373 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
UFD1-206ENST00000466373 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
UFD1-206ENST00000466373 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
UFD1-206ENST00000466373 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
UFD1-206ENST00000466373 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
UFD1-206ENST00000466373 LCE3BQ5TA77 95 aa3.17□□□□□ -1.9
UFD1-206ENST00000466373 KRTAP9-2Q9BYQ4 174 aa3.16□□□□□ -1.9
UFD1-206ENST00000466373 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
UFD1-206ENST00000466373 KRTAP12-4P60329 112 aa3.12□□□□□ -1.91
UFD1-206ENST00000466373 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
UFD1-206ENST00000466373 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
UFD1-206ENST00000466373 SPRR2EP22531 72 aa3.05□□□□□ -1.92
UFD1-206ENST00000466373 SPRR2BP35325 72 aa3.05□□□□□ -1.92
UFD1-206ENST00000466373 SPRR2AP35326 72 aa3.05□□□□□ -1.92
UFD1-206ENST00000466373 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
UFD1-206ENST00000466373 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
UFD1-206ENST00000466373 MT1AP04731 61 aa3.01□□□□□ -1.93
UFD1-206ENST00000466373 KRTAP4-6Q9BYQ5 205 aa2.99□□□□□ -1.93
UFD1-206ENST00000466373 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
UFD1-206ENST00000466373 KRTAP9-6A0A140TA67 174 aa2.93□□□□□ -1.94
UFD1-206ENST00000466373 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
UFD1-206ENST00000466373 SPRR2DP22532 72 aa2.91□□□□□ -1.94
UFD1-206ENST00000466373 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
UFD1-206ENST00000466373 KRTAP9-4Q9BYQ2 154 aa2.85□□□□□ -1.95
UFD1-206ENST00000466373 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.84□□□□□ -1.96
UFD1-206ENST00000466373 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
UFD1-206ENST00000466373 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
UFD1-206ENST00000466373 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
UFD1-206ENST00000466373 PRM1P04553 51 aa2.76□□□□□ -1.97
UFD1-206ENST00000466373 MT3P25713 68 aa2.72□□□□□ -1.97
UFD1-206ENST00000466373 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
UFD1-206ENST00000466373 NEBP20929 6669 aa2.7□□□□□ -1.98
UFD1-206ENST00000466373 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
UFD1-206ENST00000466373 MT4P47944 62 aa2.62□□□□□ -1.99
UFD1-206ENST00000466373 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
UFD1-206ENST00000466373 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
UFD1-206ENST00000466373 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
UFD1-206ENST00000466373 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
UFD1-206ENST00000466373 KRTAP20-2Q3LI61 65 aa2.5□□□□□ -2.01
UFD1-206ENST00000466373 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
UFD1-206ENST00000466373 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
UFD1-206ENST00000466373 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
UFD1-206ENST00000466373 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
UFD1-206ENST00000466373 KRTAP20-1Q3LI63 56 aa2.33□□□□□ -2.04
UFD1-206ENST00000466373 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
UFD1-206ENST00000466373 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
UFD1-206ENST00000466373 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
UFD1-206ENST00000466373 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
UFD1-206ENST00000466373 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
UFD1-206ENST00000466373 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
UFD1-206ENST00000466373 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
UFD1-206ENST00000466373 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
UFD1-206ENST00000466373 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
UFD1-206ENST00000466373 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
UFD1-206ENST00000466373 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
UFD1-206ENST00000466373 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
UFD1-206ENST00000466373 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
UFD1-206ENST00000466373 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
UFD1-206ENST00000466373 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
UFD1-206ENST00000466373 LCE1FQ5T754 118 aa1.88□□□□□ -2.11
UFD1-206ENST00000466373 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
UFD1-206ENST00000466373 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
UFD1-206ENST00000466373 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
UFD1-206ENST00000466373 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
UFD1-206ENST00000466373 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
UFD1-206ENST00000466373 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms