RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 CRIPTQ9P021 101 aa2.97□□□□□ -1.93
SPTA1-203ENST00000465741 R4GN34 69 aa2.97□□□□□ -1.93
SPTA1-203ENST00000465741 KRTAP13-4Q3LI77 160 aa2.96□□□□□ -1.94
SPTA1-203ENST00000465741 UQCR11O14957 56 aa2.95□□□□□ -1.94
SPTA1-203ENST00000465741 FSIP2Q5CZC0 6907 aa2.94□□□□□ -1.94
SPTA1-203ENST00000465741 A6NED7 52 aa2.94□□□□□ -1.94
SPTA1-203ENST00000465741 LINC01554Q52M75 96 aa2.94□□□□□ -1.94
SPTA1-203ENST00000465741 A0A0D9SG42 100 aa2.93□□□□□ -1.94
SPTA1-203ENST00000465741 MIR22HGQ0VDD5 57 aa2.93□□□□□ -1.94
SPTA1-203ENST00000465741 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
SPTA1-203ENST00000465741 K7ERS5 55 aa2.88□□□□□ -1.95
SPTA1-203ENST00000465741 USH2AO75445 5202 aa2.88□□□□□ -1.95
SPTA1-203ENST00000465741 KRTAP19-8Q3LI54 63 aa2.86□□□□□ -1.95
SPTA1-203ENST00000465741 CDC42SE1Q9NRR8 79 aa2.86□□□□□ -1.95
SPTA1-203ENST00000465741 BRK1Q8WUW1 75 aa2.85□□□□□ -1.95
SPTA1-203ENST00000465741 PLAC4Q8WY50 150 aa2.85□□□□□ -1.95
SPTA1-203ENST00000465741 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
SPTA1-203ENST00000465741 A6NN06 94 aa2.83□□□□□ -1.96
SPTA1-203ENST00000465741 MT1BP07438 61 aa2.83□□□□□ -1.96
SPTA1-203ENST00000465741 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SPTA1-203ENST00000465741 SSPOA2VEC9 5147 aa2.81□□□□□ -1.96
SPTA1-203ENST00000465741 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
SPTA1-203ENST00000465741 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
SPTA1-203ENST00000465741 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
SPTA1-203ENST00000465741 MT1XP80297 61 aa2.73□□□□□ -1.97
SPTA1-203ENST00000465741 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
SPTA1-203ENST00000465741 C10orf95Q9H7T3 257 aa2.71□□□□□ -1.98
SPTA1-203ENST00000465741 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SPTA1-203ENST00000465741 PRO2289Q9P1D8 64 aa2.7□□□□□ -1.98
SPTA1-203ENST00000465741 ROMO1P60602 79 aa2.68□□□□□ -1.98
SPTA1-203ENST00000465741 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
SPTA1-203ENST00000465741 TNP1P09430 55 aa2.63□□□□□ -1.99
SPTA1-203ENST00000465741 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
SPTA1-203ENST00000465741 KMT2DO14686 5537 aa2.55□□□□□ -2
SPTA1-203ENST00000465741 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
SPTA1-203ENST00000465741 KTN1-AS1Q86SY8 53 aa2.53□□□□□ -2
SPTA1-203ENST00000465741 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
SPTA1-203ENST00000465741 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
SPTA1-203ENST00000465741 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
SPTA1-203ENST00000465741 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
SPTA1-203ENST00000465741 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
SPTA1-203ENST00000465741 KRTAP2-3P0C7H8 128 aa2.44□□□□□ -2.02
SPTA1-203ENST00000465741 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
SPTA1-203ENST00000465741 KRTAP2-4Q9BYR9 128 aa2.44□□□□□ -2.02
SPTA1-203ENST00000465741 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
SPTA1-203ENST00000465741 KRTAP19-7Q3SYF9 63 aa2.43□□□□□ -2.02
SPTA1-203ENST00000465741 SPRR2EP22531 72 aa2.42□□□□□ -2.02
SPTA1-203ENST00000465741 SPRR2BP35325 72 aa2.42□□□□□ -2.02
SPTA1-203ENST00000465741 SPRR2AP35326 72 aa2.42□□□□□ -2.02
SPTA1-203ENST00000465741 MT1EP04732 61 aa2.4□□□□□ -2.03
SPTA1-203ENST00000465741 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
SPTA1-203ENST00000465741 NEBP20929 6669 aa2.38□□□□□ -2.03
SPTA1-203ENST00000465741 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
SPTA1-203ENST00000465741 KRTAP2-1Q9BYU5 128 aa2.35□□□□□ -2.03
SPTA1-203ENST00000465741 SPRR2DP22532 72 aa2.34□□□□□ -2.03
SPTA1-203ENST00000465741 MT1LQ93083 61 aa2.34□□□□□ -2.03
SPTA1-203ENST00000465741 KRTAP19-3Q7Z4W3 81 aa2.31□□□□□ -2.04
SPTA1-203ENST00000465741 MT1GP13640 62 aa2.3□□□□□ -2.04
SPTA1-203ENST00000465741 MT1MQ8N339 61 aa2.26□□□□□ -2.05
SPTA1-203ENST00000465741 DSTQ03001 7570 aaKnown RBP2.17□□□□□ -2.06
SPTA1-203ENST00000465741 MT4P47944 62 aa2.05□□□□□ -2.08
SPTA1-203ENST00000465741 SYNE1Q8NF91 8797 aaKnown RBP1.98□□□□□ -2.09
SPTA1-203ENST00000465741 MT1AP04731 61 aa1.98□□□□□ -2.09
SPTA1-203ENST00000465741 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
SPTA1-203ENST00000465741 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
SPTA1-203ENST00000465741 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
SPTA1-203ENST00000465741 KRTAP5-10Q6L8G5 202 aa1.93□□□□□ -2.1
SPTA1-203ENST00000465741 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
SPTA1-203ENST00000465741 AHNAK2Q8IVF2 5795 aa1.86□□□□□ -2.11
SPTA1-203ENST00000465741 KRTAP6-2Q3LI66 62 aa1.84□□□□□ -2.11
SPTA1-203ENST00000465741 INE1O15225 51 aa1.61□□□□□ -2.15
SPTA1-203ENST00000465741 MUC5ACP98088 5654 aa1.59□□□□□ -2.15
SPTA1-203ENST00000465741 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
SPTA1-203ENST00000465741 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
SPTA1-203ENST00000465741 PRM1P04553 51 aa1.4□□□□□ -2.19
SPTA1-203ENST00000465741 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
SPTA1-203ENST00000465741 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
SPTA1-203ENST00000465741 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 72 ms