RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
HDAC6-215ENST00000465457 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
HDAC6-215ENST00000465457 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
HDAC6-215ENST00000465457 LCE3BQ5TA77 95 aa5.65□□□□□ -1.5
HDAC6-215ENST00000465457 DSTQ03001 7570 aaKnown RBP5.61□□□□□ -1.51
HDAC6-215ENST00000465457 MT1XP80297 61 aa5.59□□□□□ -1.51
HDAC6-215ENST00000465457 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
HDAC6-215ENST00000465457 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
HDAC6-215ENST00000465457 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
HDAC6-215ENST00000465457 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
HDAC6-215ENST00000465457 KRTAP10-12P60413 245 aa5.41□□□□□ -1.54
HDAC6-215ENST00000465457 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
HDAC6-215ENST00000465457 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
HDAC6-215ENST00000465457 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
HDAC6-215ENST00000465457 AHNAK2Q8IVF2 5795 aa5.25□□□□□ -1.57
HDAC6-215ENST00000465457 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
HDAC6-215ENST00000465457 LOC100996750A0A140TA64 210 aa5.22□□□□□ -1.57
HDAC6-215ENST00000465457 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
HDAC6-215ENST00000465457 A0A0A0MQY5 61 aa5.21□□□□□ -1.58
HDAC6-215ENST00000465457 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
HDAC6-215ENST00000465457 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
HDAC6-215ENST00000465457 KRTAP5-10Q6L8G5 202 aa5.17□□□□□ -1.58
HDAC6-215ENST00000465457 MT4P47944 62 aa5.14□□□□□ -1.59
HDAC6-215ENST00000465457 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
HDAC6-215ENST00000465457 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
HDAC6-215ENST00000465457 SPRR5A0A1B0GTR4 108 aa5.02□□□□□ -1.61
HDAC6-215ENST00000465457 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
HDAC6-215ENST00000465457 KRTAP5-7Q6L8G8 165 aa5.01□□□□□ -1.61
HDAC6-215ENST00000465457 KRTAP19-3Q7Z4W3 81 aa5□□□□□ -1.61
HDAC6-215ENST00000465457 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
HDAC6-215ENST00000465457 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
HDAC6-215ENST00000465457 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
HDAC6-215ENST00000465457 MT1EP04732 61 aa4.95□□□□□ -1.62
HDAC6-215ENST00000465457 KRTAP5-3Q6L8H2 238 aa4.91□□□□□ -1.62
HDAC6-215ENST00000465457 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
HDAC6-215ENST00000465457 KRTAP5-4Q6L8H1 288 aa4.86□□□□□ -1.63
HDAC6-215ENST00000465457 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
HDAC6-215ENST00000465457 MT1LQ93083 61 aa4.83□□□□□ -1.64
HDAC6-215ENST00000465457 MT1GP13640 62 aa4.76□□□□□ -1.65
HDAC6-215ENST00000465457 MT1MQ8N339 61 aa4.76□□□□□ -1.65
HDAC6-215ENST00000465457 KRTAP4-3Q9BYR4 195 aa4.76□□□□□ -1.65
HDAC6-215ENST00000465457 KRTAP9-4Q9BYQ2 154 aa4.74□□□□□ -1.65
HDAC6-215ENST00000465457 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
HDAC6-215ENST00000465457 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
HDAC6-215ENST00000465457 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
HDAC6-215ENST00000465457 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
HDAC6-215ENST00000465457 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
HDAC6-215ENST00000465457 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
HDAC6-215ENST00000465457 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
HDAC6-215ENST00000465457 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
HDAC6-215ENST00000465457 MUC5BQ9HC84 5762 aaPredicted RBP4.36□□□□□ -1.71
HDAC6-215ENST00000465457 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
HDAC6-215ENST00000465457 KRTAP12-4P60329 112 aa4.34□□□□□ -1.71
HDAC6-215ENST00000465457 KRTAP5-8O75690 187 aa4.29□□□□□ -1.72
HDAC6-215ENST00000465457 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
HDAC6-215ENST00000465457 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
HDAC6-215ENST00000465457 MT1AP04731 61 aa4.14□□□□□ -1.75
HDAC6-215ENST00000465457 INE1O15225 51 aa4.11□□□□□ -1.75
HDAC6-215ENST00000465457 KRTAP4-2Q9BYR5 136 aa4.08□□□□□ -1.76
HDAC6-215ENST00000465457 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
HDAC6-215ENST00000465457 MT3P25713 68 aa3.97□□□□□ -1.77
HDAC6-215ENST00000465457 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
HDAC6-215ENST00000465457 KRTAP5-1Q6L8H4 278 aa3.85□□□□□ -1.79
HDAC6-215ENST00000465457 LCE3DQ9BYE3 92 aa3.68□□□□□ -1.82
HDAC6-215ENST00000465457 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
HDAC6-215ENST00000465457 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
HDAC6-215ENST00000465457 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
HDAC6-215ENST00000465457 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
HDAC6-215ENST00000465457 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
HDAC6-215ENST00000465457 PRM1P04553 51 aa3.14□□□□□ -1.91
HDAC6-215ENST00000465457 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
HDAC6-215ENST00000465457 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
HDAC6-215ENST00000465457 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
HDAC6-215ENST00000465457 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
HDAC6-215ENST00000465457 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
HDAC6-215ENST00000465457 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
HDAC6-215ENST00000465457 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
HDAC6-215ENST00000465457 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 64.1 ms