RNA–Protein interactions for RNA: ENST00000465224.5

CNNM3-203, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 1 (best)

Gene CNNM3, Length 2,607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-203ENST00000465224 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
CNNM3-203ENST00000465224 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
CNNM3-203ENST00000465224 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
CNNM3-203ENST00000465224 KRTAP9-6A8MVA2 160 aa3.53□□□□□ -1.84
CNNM3-203ENST00000465224 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
CNNM3-203ENST00000465224 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
CNNM3-203ENST00000465224 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
CNNM3-203ENST00000465224 KRTAP2-1Q9BYU5 128 aa3.5□□□□□ -1.85
CNNM3-203ENST00000465224 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
CNNM3-203ENST00000465224 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
CNNM3-203ENST00000465224 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
CNNM3-203ENST00000465224 MT1EP04732 61 aa3.4□□□□□ -1.86
CNNM3-203ENST00000465224 MT1LQ93083 61 aa3.4□□□□□ -1.86
CNNM3-203ENST00000465224 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
CNNM3-203ENST00000465224 MUC12Q9UKN1 5478 aa3.31□□□□□ -1.88
CNNM3-203ENST00000465224 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CNNM3-203ENST00000465224 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
CNNM3-203ENST00000465224 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
CNNM3-203ENST00000465224 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
CNNM3-203ENST00000465224 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
CNNM3-203ENST00000465224 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
CNNM3-203ENST00000465224 MT1GP13640 62 aa3.21□□□□□ -1.9
CNNM3-203ENST00000465224 MT1MQ8N339 61 aa3.18□□□□□ -1.9
CNNM3-203ENST00000465224 SPRR2FQ96RM1 72 aa3.17□□□□□ -1.9
CNNM3-203ENST00000465224 LCE1AQ5T7P2 110 aa3.17□□□□□ -1.9
CNNM3-203ENST00000465224 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
CNNM3-203ENST00000465224 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
CNNM3-203ENST00000465224 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
CNNM3-203ENST00000465224 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
CNNM3-203ENST00000465224 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
CNNM3-203ENST00000465224 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
CNNM3-203ENST00000465224 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
CNNM3-203ENST00000465224 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
CNNM3-203ENST00000465224 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
CNNM3-203ENST00000465224 SPRR2EP22531 72 aa3□□□□□ -1.93
CNNM3-203ENST00000465224 SPRR2BP35325 72 aa3□□□□□ -1.93
CNNM3-203ENST00000465224 SPRR2AP35326 72 aa3□□□□□ -1.93
CNNM3-203ENST00000465224 PRM1P04553 51 aa2.99□□□□□ -1.93
CNNM3-203ENST00000465224 LCE3BQ5TA77 95 aa2.96□□□□□ -1.94
CNNM3-203ENST00000465224 SYNE1Q8NF91 8797 aaKnown RBP2.96□□□□□ -1.94
CNNM3-203ENST00000465224 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
CNNM3-203ENST00000465224 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
CNNM3-203ENST00000465224 KRTAP6-1Q3LI64 71 aa2.91□□□□□ -1.94
CNNM3-203ENST00000465224 LCE1DQ5T752 114 aa2.9□□□□□ -1.94
CNNM3-203ENST00000465224 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
CNNM3-203ENST00000465224 SPRR2DP22532 72 aa2.88□□□□□ -1.95
CNNM3-203ENST00000465224 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
CNNM3-203ENST00000465224 MT1AP04731 61 aa2.84□□□□□ -1.96
CNNM3-203ENST00000465224 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CNNM3-203ENST00000465224 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
CNNM3-203ENST00000465224 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
CNNM3-203ENST00000465224 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
CNNM3-203ENST00000465224 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
CNNM3-203ENST00000465224 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
CNNM3-203ENST00000465224 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
CNNM3-203ENST00000465224 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
CNNM3-203ENST00000465224 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
CNNM3-203ENST00000465224 MT3P25713 68 aa2.54□□□□□ -2
CNNM3-203ENST00000465224 MT4P47944 62 aa2.53□□□□□ -2
CNNM3-203ENST00000465224 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
CNNM3-203ENST00000465224 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
CNNM3-203ENST00000465224 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
CNNM3-203ENST00000465224 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
CNNM3-203ENST00000465224 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
CNNM3-203ENST00000465224 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
CNNM3-203ENST00000465224 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
CNNM3-203ENST00000465224 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.08
CNNM3-203ENST00000465224 KRTAP4-2Q9BYR5 136 aa2.04□□□□□ -2.08
CNNM3-203ENST00000465224 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.09
CNNM3-203ENST00000465224 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
CNNM3-203ENST00000465224 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CNNM3-203ENST00000465224 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
CNNM3-203ENST00000465224 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
CNNM3-203ENST00000465224 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
CNNM3-203ENST00000465224 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CNNM3-203ENST00000465224 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
CNNM3-203ENST00000465224 KRTAP4-12Q9BQ66 201 aa1.71□□□□□ -2.13
CNNM3-203ENST00000465224 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 66.5 ms