RNA–Protein interactions for RNA: ENST00000464632.5

APTX-212, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-212ENST00000464632 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
APTX-212ENST00000464632 KRTAP4-8Q9BYQ9 185 aa4.38□□□□□ -1.71
APTX-212ENST00000464632 ROMO1P60602 79 aa4.36□□□□□ -1.71
APTX-212ENST00000464632 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
APTX-212ENST00000464632 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
APTX-212ENST00000464632 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
APTX-212ENST00000464632 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
APTX-212ENST00000464632 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
APTX-212ENST00000464632 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
APTX-212ENST00000464632 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
APTX-212ENST00000464632 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
APTX-212ENST00000464632 A0A0A0MQY5 61 aa4.16□□□□□ -1.74
APTX-212ENST00000464632 TNP1P09430 55 aa4.16□□□□□ -1.74
APTX-212ENST00000464632 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
APTX-212ENST00000464632 LCE5AQ5TCM9 118 aa4.08□□□□□ -1.76
APTX-212ENST00000464632 PP632Q6XCG6 107 aa4.06□□□□□ -1.76
APTX-212ENST00000464632 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
APTX-212ENST00000464632 MT4P47944 62 aa4.01□□□□□ -1.77
APTX-212ENST00000464632 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
APTX-212ENST00000464632 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
APTX-212ENST00000464632 KRTAP19-7Q3SYF9 63 aa3.98□□□□□ -1.77
APTX-212ENST00000464632 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
APTX-212ENST00000464632 MT1EP04732 61 aa3.96□□□□□ -1.78
APTX-212ENST00000464632 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
APTX-212ENST00000464632 KRTAP5-7Q6L8G8 165 aa3.92□□□□□ -1.78
APTX-212ENST00000464632 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
APTX-212ENST00000464632 MT1GP13640 62 aa3.87□□□□□ -1.79
APTX-212ENST00000464632 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
APTX-212ENST00000464632 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
APTX-212ENST00000464632 KRTAP5-3Q6L8H2 238 aa3.84□□□□□ -1.79
APTX-212ENST00000464632 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
APTX-212ENST00000464632 MT1MQ8N339 61 aa3.8□□□□□ -1.8
APTX-212ENST00000464632 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
APTX-212ENST00000464632 SPRR5A0A1B0GTR4 108 aa3.77□□□□□ -1.81
APTX-212ENST00000464632 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
APTX-212ENST00000464632 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
APTX-212ENST00000464632 MT1LQ93083 61 aa3.71□□□□□ -1.82
APTX-212ENST00000464632 LUZP6Q538Z0 58 aa3.68□□□□□ -1.82
APTX-212ENST00000464632 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
APTX-212ENST00000464632 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
APTX-212ENST00000464632 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
APTX-212ENST00000464632 MUC5BQ9HC84 5762 aaPredicted RBP3.55□□□□□ -1.84
APTX-212ENST00000464632 LCE3CQ5T5A8 94 aa3.55□□□□□ -1.84
APTX-212ENST00000464632 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
APTX-212ENST00000464632 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
APTX-212ENST00000464632 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
APTX-212ENST00000464632 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
APTX-212ENST00000464632 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
APTX-212ENST00000464632 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
APTX-212ENST00000464632 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.87
APTX-212ENST00000464632 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
APTX-212ENST00000464632 KRTAP5-8O75690 187 aa3.35□□□□□ -1.87
APTX-212ENST00000464632 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
APTX-212ENST00000464632 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
APTX-212ENST00000464632 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
APTX-212ENST00000464632 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
APTX-212ENST00000464632 INE1O15225 51 aa3.23□□□□□ -1.89
APTX-212ENST00000464632 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
APTX-212ENST00000464632 MT1AP04731 61 aa3.15□□□□□ -1.91
APTX-212ENST00000464632 KRTAP6-2Q3LI66 62 aa3.1□□□□□ -1.91
APTX-212ENST00000464632 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
APTX-212ENST00000464632 MT3P25713 68 aa2.91□□□□□ -1.94
APTX-212ENST00000464632 LCE1EQ5T753 118 aa2.77□□□□□ -1.97
APTX-212ENST00000464632 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
APTX-212ENST00000464632 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
APTX-212ENST00000464632 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
APTX-212ENST00000464632 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
APTX-212ENST00000464632 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
APTX-212ENST00000464632 LCE1CQ5T751 118 aa2.57□□□□□ -2
APTX-212ENST00000464632 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
APTX-212ENST00000464632 PHGR1C9JFL3 82 aa2.36□□□□□ -2.03
APTX-212ENST00000464632 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
APTX-212ENST00000464632 PRM1P04553 51 aa2.26□□□□□ -2.05
APTX-212ENST00000464632 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
APTX-212ENST00000464632 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
APTX-212ENST00000464632 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
APTX-212ENST00000464632 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
APTX-212ENST00000464632 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 70.9 ms