RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
CDKL5-203ENST00000463994 KRTAP2-3P0C7H8 128 aa2.62□□□□□ -1.99
CDKL5-203ENST00000463994 KRTAP2-4Q9BYR9 128 aa2.62□□□□□ -1.99
CDKL5-203ENST00000463994 KRTAP2-1Q9BYU5 128 aa2.62□□□□□ -1.99
CDKL5-203ENST00000463994 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CDKL5-203ENST00000463994 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -1.99
CDKL5-203ENST00000463994 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
CDKL5-203ENST00000463994 MT2AP02795 61 aa2.53□□□□□ -2
CDKL5-203ENST00000463994 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
CDKL5-203ENST00000463994 MUC2Q02817 5179 aa2.51□□□□□ -2.01
CDKL5-203ENST00000463994 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
CDKL5-203ENST00000463994 KRTAP19-6Q3LI70 58 aa2.5□□□□□ -2.01
CDKL5-203ENST00000463994 MT1FP04733 61 aa2.48□□□□□ -2.01
CDKL5-203ENST00000463994 LCE3EQ5T5B0 92 aa2.48□□□□□ -2.01
CDKL5-203ENST00000463994 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
CDKL5-203ENST00000463994 MT1XP80297 61 aa2.46□□□□□ -2.02
CDKL5-203ENST00000463994 KRTAP6-3Q3LI67 103 aa2.46□□□□□ -2.02
CDKL5-203ENST00000463994 MT1BP07438 61 aa2.45□□□□□ -2.02
CDKL5-203ENST00000463994 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
CDKL5-203ENST00000463994 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
CDKL5-203ENST00000463994 KRTAP19-5Q3LI72 72 aa2.38□□□□□ -2.03
CDKL5-203ENST00000463994 USH2AO75445 5202 aa2.38□□□□□ -2.03
CDKL5-203ENST00000463994 MT3P25713 68 aa2.35□□□□□ -2.03
CDKL5-203ENST00000463994 FCGBPQ9Y6R7 5405 aaPredicted RBP2.33□□□□□ -2.04
CDKL5-203ENST00000463994 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
CDKL5-203ENST00000463994 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
CDKL5-203ENST00000463994 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
CDKL5-203ENST00000463994 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
CDKL5-203ENST00000463994 NEBP20929 6669 aa2.24□□□□□ -2.05
CDKL5-203ENST00000463994 PRM1P04553 51 aa2.21□□□□□ -2.05
CDKL5-203ENST00000463994 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
CDKL5-203ENST00000463994 KRTAP19-7Q3SYF9 63 aa2.2□□□□□ -2.06
CDKL5-203ENST00000463994 MACF1Q9UPN3 7388 aaKnown RBP2.18□□□□□ -2.06
CDKL5-203ENST00000463994 MT1LQ93083 61 aa2.15□□□□□ -2.06
CDKL5-203ENST00000463994 MT1EP04732 61 aa2.13□□□□□ -2.07
CDKL5-203ENST00000463994 SPRR2EP22531 72 aa2.13□□□□□ -2.07
CDKL5-203ENST00000463994 SPRR2BP35325 72 aa2.13□□□□□ -2.07
CDKL5-203ENST00000463994 SPRR2AP35326 72 aa2.13□□□□□ -2.07
CDKL5-203ENST00000463994 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
CDKL5-203ENST00000463994 SPRR2FQ96RM1 72 aa2.1□□□□□ -2.07
CDKL5-203ENST00000463994 MT1AP04731 61 aa2.09□□□□□ -2.08
CDKL5-203ENST00000463994 SPRR2DP22532 72 aa2.07□□□□□ -2.08
CDKL5-203ENST00000463994 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
CDKL5-203ENST00000463994 SYNE2Q8WXH0 6885 aaKnown RBP2.07□□□□□ -2.08
CDKL5-203ENST00000463994 KMT2DO14686 5537 aa2.05□□□□□ -2.08
CDKL5-203ENST00000463994 MT1GP13640 62 aa2.02□□□□□ -2.09
CDKL5-203ENST00000463994 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
CDKL5-203ENST00000463994 HMCN1Q96RW7 5635 aa1.99□□□□□ -2.09
CDKL5-203ENST00000463994 MT1MQ8N339 61 aa1.98□□□□□ -2.09
CDKL5-203ENST00000463994 MUC12Q9UKN1 5478 aa1.98□□□□□ -2.09
CDKL5-203ENST00000463994 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
CDKL5-203ENST00000463994 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
CDKL5-203ENST00000463994 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
CDKL5-203ENST00000463994 KRTAP4-3Q9BYR4 195 aa1.96□□□□□ -2.1
CDKL5-203ENST00000463994 GPR98Q8WXG9 6306 aa1.89□□□□□ -2.11
CDKL5-203ENST00000463994 OBSCNQ5VST9 7968 aa1.86□□□□□ -2.11
CDKL5-203ENST00000463994 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
CDKL5-203ENST00000463994 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.12
CDKL5-203ENST00000463994 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
CDKL5-203ENST00000463994 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
CDKL5-203ENST00000463994 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CDKL5-203ENST00000463994 KRTAP5-7Q6L8G8 165 aa1.78□□□□□ -2.12
CDKL5-203ENST00000463994 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
CDKL5-203ENST00000463994 AHNAK2Q8IVF2 5795 aa1.76□□□□□ -2.13
CDKL5-203ENST00000463994 MT4P47944 62 aa1.72□□□□□ -2.13
CDKL5-203ENST00000463994 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
CDKL5-203ENST00000463994 KRTAP20-2Q3LI61 65 aa1.69□□□□□ -2.14
CDKL5-203ENST00000463994 LCE1CQ5T751 118 aa1.65□□□□□ -2.15
CDKL5-203ENST00000463994 LCE1BQ5T7P3 118 aa1.65□□□□□ -2.15
CDKL5-203ENST00000463994 DSTQ03001 7570 aaKnown RBP1.65□□□□□ -2.15
CDKL5-203ENST00000463994 MUC5BQ9HC84 5762 aaPredicted RBP1.63□□□□□ -2.15
CDKL5-203ENST00000463994 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
CDKL5-203ENST00000463994 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
CDKL5-203ENST00000463994 KRTAP21-1Q3LI58 79 aa1.46□□□□□ -2.18
CDKL5-203ENST00000463994 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
CDKL5-203ENST00000463994 KRTAP21-2Q3LI59 83 aa1.17□□□□□ -2.22
CDKL5-203ENST00000463994 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
CDKL5-203ENST00000463994 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 359.5 ms