RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
XRN1-203ENST00000463916 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
XRN1-203ENST00000463916 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
XRN1-203ENST00000463916 LCE3AQ5TA76 89 aa4.68□□□□□ -1.66
XRN1-203ENST00000463916 TNP1P09430 55 aa4.67□□□□□ -1.66
XRN1-203ENST00000463916 MT1GP13640 62 aa4.65□□□□□ -1.66
XRN1-203ENST00000463916 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.66
XRN1-203ENST00000463916 A6NED7 52 aa4.65□□□□□ -1.67
XRN1-203ENST00000463916 UQCR11O14957 56 aa4.64□□□□□ -1.67
XRN1-203ENST00000463916 MT1LQ93083 61 aa4.62□□□□□ -1.67
XRN1-203ENST00000463916 MT1MQ8N339 61 aa4.59□□□□□ -1.67
XRN1-203ENST00000463916 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
XRN1-203ENST00000463916 H3BS24 57 aa4.57□□□□□ -1.68
XRN1-203ENST00000463916 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
XRN1-203ENST00000463916 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
XRN1-203ENST00000463916 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
XRN1-203ENST00000463916 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
XRN1-203ENST00000463916 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
XRN1-203ENST00000463916 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
XRN1-203ENST00000463916 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
XRN1-203ENST00000463916 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
XRN1-203ENST00000463916 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
XRN1-203ENST00000463916 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
XRN1-203ENST00000463916 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
XRN1-203ENST00000463916 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
XRN1-203ENST00000463916 K7ERS5 55 aa4.4□□□□□ -1.71
XRN1-203ENST00000463916 LCE4AQ5TA78 99 aa4.38□□□□□ -1.71
XRN1-203ENST00000463916 MT4P47944 62 aa4.37□□□□□ -1.71
XRN1-203ENST00000463916 HMCN1Q96RW7 5635 aa4.36□□□□□ -1.71
XRN1-203ENST00000463916 KRTAP5-4Q6L8H1 288 aa4.35□□□□□ -1.71
XRN1-203ENST00000463916 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
XRN1-203ENST00000463916 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
XRN1-203ENST00000463916 KRTAP23-1A1A580 65 aa4.25□□□□□ -1.73
XRN1-203ENST00000463916 KRTAP5-5Q701N2 237 aaPredicted RBP4.22□□□□□ -1.73
XRN1-203ENST00000463916 ROMO1P60602 79 aa4.21□□□□□ -1.74
XRN1-203ENST00000463916 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
XRN1-203ENST00000463916 KRTAP19-4Q3LI73 84 aa4.17□□□□□ -1.74
XRN1-203ENST00000463916 LCE3CQ5T5A8 94 aa4.14□□□□□ -1.75
XRN1-203ENST00000463916 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
XRN1-203ENST00000463916 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
XRN1-203ENST00000463916 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
XRN1-203ENST00000463916 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
XRN1-203ENST00000463916 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
XRN1-203ENST00000463916 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
XRN1-203ENST00000463916 A0A0A0MQY5 61 aa3.97□□□□□ -1.77
XRN1-203ENST00000463916 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.77
XRN1-203ENST00000463916 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
XRN1-203ENST00000463916 MT1AP04731 61 aa3.91□□□□□ -1.78
XRN1-203ENST00000463916 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
XRN1-203ENST00000463916 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
XRN1-203ENST00000463916 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
XRN1-203ENST00000463916 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
XRN1-203ENST00000463916 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
XRN1-203ENST00000463916 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
XRN1-203ENST00000463916 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
XRN1-203ENST00000463916 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
XRN1-203ENST00000463916 MT3P25713 68 aa3.57□□□□□ -1.84
XRN1-203ENST00000463916 KRTAP5-1Q6L8H4 278 aa3.43□□□□□ -1.86
XRN1-203ENST00000463916 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
XRN1-203ENST00000463916 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
XRN1-203ENST00000463916 AHNAKQ09666 5890 aaKnown RBP3.34□□□□□ -1.88
XRN1-203ENST00000463916 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
XRN1-203ENST00000463916 INE1O15225 51 aa3.24□□□□□ -1.89
XRN1-203ENST00000463916 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.9
XRN1-203ENST00000463916 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
XRN1-203ENST00000463916 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
XRN1-203ENST00000463916 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
XRN1-203ENST00000463916 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
XRN1-203ENST00000463916 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
XRN1-203ENST00000463916 LCE1FQ5T754 118 aa2.64□□□□□ -1.99
XRN1-203ENST00000463916 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
XRN1-203ENST00000463916 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
XRN1-203ENST00000463916 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
XRN1-203ENST00000463916 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
XRN1-203ENST00000463916 PRM1P04553 51 aa2.15□□□□□ -2.07
XRN1-203ENST00000463916 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
XRN1-203ENST00000463916 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 108.1 ms