RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 BRK1Q8WUW1 75 aa7.3□□□□□ -1.24
NUP43-205ENST00000463048 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
NUP43-205ENST00000463048 KRTAP12-3P60328 96 aa7.27□□□□□ -1.25
NUP43-205ENST00000463048 LCE5AQ5TCM9 118 aa7.27□□□□□ -1.25
NUP43-205ENST00000463048 MT1LQ93083 61 aa7.24□□□□□ -1.25
NUP43-205ENST00000463048 MT1GP13640 62 aa7.18□□□□□ -1.26
NUP43-205ENST00000463048 LCE3BQ5TA77 95 aa7.18□□□□□ -1.26
NUP43-205ENST00000463048 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
NUP43-205ENST00000463048 PP632Q6XCG6 107 aa7.13□□□□□ -1.27
NUP43-205ENST00000463048 MT1MQ8N339 61 aa7.11□□□□□ -1.27
NUP43-205ENST00000463048 KRTAP2-2Q9BYT5 123 aa7.09□□□□□ -1.27
NUP43-205ENST00000463048 KRTAP2-1Q9BYU5 128 aa7.09□□□□□ -1.27
NUP43-205ENST00000463048 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
NUP43-205ENST00000463048 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
NUP43-205ENST00000463048 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
NUP43-205ENST00000463048 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
NUP43-205ENST00000463048 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
NUP43-205ENST00000463048 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
NUP43-205ENST00000463048 KRTAP19-4Q3LI73 84 aa6.7□□□□□ -1.34
NUP43-205ENST00000463048 PRO0628Q9UI54 55 aa6.66□□□□□ -1.34
NUP43-205ENST00000463048 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
NUP43-205ENST00000463048 LOC100996750A0A140TA64 210 aa6.6□□□□□ -1.35
NUP43-205ENST00000463048 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
NUP43-205ENST00000463048 LCE4AQ5TA78 99 aa6.52□□□□□ -1.37
NUP43-205ENST00000463048 MT4P47944 62 aa6.51□□□□□ -1.37
NUP43-205ENST00000463048 GPR98Q8WXG9 6306 aa6.47□□□□□ -1.37
NUP43-205ENST00000463048 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
NUP43-205ENST00000463048 KRTAP5-4Q6L8H1 288 aa6.46□□□□□ -1.38
NUP43-205ENST00000463048 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
NUP43-205ENST00000463048 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
NUP43-205ENST00000463048 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
NUP43-205ENST00000463048 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
NUP43-205ENST00000463048 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
NUP43-205ENST00000463048 H3BS24 57 aa6.18□□□□□ -1.42
NUP43-205ENST00000463048 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
NUP43-205ENST00000463048 MT1AP04731 61 aa6.14□□□□□ -1.43
NUP43-205ENST00000463048 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
NUP43-205ENST00000463048 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
NUP43-205ENST00000463048 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
NUP43-205ENST00000463048 SPRR5A0A1B0GTR4 108 aa6.08□□□□□ -1.44
NUP43-205ENST00000463048 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
NUP43-205ENST00000463048 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
NUP43-205ENST00000463048 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
NUP43-205ENST00000463048 KRTAP5-10Q6L8G5 202 aa5.89□□□□□ -1.47
NUP43-205ENST00000463048 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
NUP43-205ENST00000463048 KRTAP6-2Q3LI66 62 aa5.78□□□□□ -1.48
NUP43-205ENST00000463048 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
NUP43-205ENST00000463048 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
NUP43-205ENST00000463048 MT3P25713 68 aa5.6□□□□□ -1.51
NUP43-205ENST00000463048 KRTAP4-11Q9BYQ6 195 aa5.47□□□□□ -1.53
NUP43-205ENST00000463048 LUZP6Q538Z0 58 aa5.4□□□□□ -1.54
NUP43-205ENST00000463048 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
NUP43-205ENST00000463048 KRTAP5-8O75690 187 aa5.28□□□□□ -1.56
NUP43-205ENST00000463048 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
NUP43-205ENST00000463048 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
NUP43-205ENST00000463048 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
NUP43-205ENST00000463048 MUC5ACP98088 5654 aa4.96□□□□□ -1.61
NUP43-205ENST00000463048 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
NUP43-205ENST00000463048 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
NUP43-205ENST00000463048 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
NUP43-205ENST00000463048 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
NUP43-205ENST00000463048 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
NUP43-205ENST00000463048 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
NUP43-205ENST00000463048 KRTAP4-2Q9BYR5 136 aa4.72□□□□□ -1.65
NUP43-205ENST00000463048 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.66
NUP43-205ENST00000463048 LCE1CQ5T751 118 aa4.63□□□□□ -1.67
NUP43-205ENST00000463048 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
NUP43-205ENST00000463048 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
NUP43-205ENST00000463048 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
NUP43-205ENST00000463048 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
NUP43-205ENST00000463048 LCE1FQ5T754 118 aa3.9□□□□□ -1.79
NUP43-205ENST00000463048 INE1O15225 51 aa3.83□□□□□ -1.8
NUP43-205ENST00000463048 PRM1P04553 51 aa3.83□□□□□ -1.8
NUP43-205ENST00000463048 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
NUP43-205ENST00000463048 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
NUP43-205ENST00000463048 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
NUP43-205ENST00000463048 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
NUP43-205ENST00000463048 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 95.7 ms