RNA–Protein interactions for RNA: ENST00000463047.1

TFRC-206, Transcript of transferrin receptor, humanhuman

TSL 2

Gene TFRC, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-206ENST00000463047 KRTAP23-1A1A580 65 aa1.82□□□□□ -2.12
TFRC-206ENST00000463047 KRTAP25-1Q3LHN0 102 aa1.8□□□□□ -2.12
TFRC-206ENST00000463047 KRTAP10-12P60413 245 aa1.78□□□□□ -2.12
TFRC-206ENST00000463047 FSIP2Q5CZC0 6907 aa1.77□□□□□ -2.13
TFRC-206ENST00000463047 FCGBPQ9Y6R7 5405 aaPredicted RBP1.77□□□□□ -2.13
TFRC-206ENST00000463047 KTN1-AS1Q86SY8 53 aa1.76□□□□□ -2.13
TFRC-206ENST00000463047 KMT2DO14686 5537 aa1.74□□□□□ -2.13
TFRC-206ENST00000463047 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
TFRC-206ENST00000463047 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
TFRC-206ENST00000463047 SVIPQ8NHG7 77 aa1.74□□□□□ -2.13
TFRC-206ENST00000463047 PRAC1Q96KF2 57 aa1.74□□□□□ -2.13
TFRC-206ENST00000463047 PP632Q6XCG6 107 aa1.73□□□□□ -2.13
TFRC-206ENST00000463047 KRTAP8-1Q8IUC2 63 aa1.73□□□□□ -2.13
TFRC-206ENST00000463047 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
TFRC-206ENST00000463047 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
TFRC-206ENST00000463047 KRTAP5-2Q701N4 177 aa1.68□□□□□ -2.14
TFRC-206ENST00000463047 SPRR2FQ96RM1 72 aa1.68□□□□□ -2.14
TFRC-206ENST00000463047 KRTAP12-3P60328 96 aa1.67□□□□□ -2.14
TFRC-206ENST00000463047 LCE1AQ5T7P2 110 aa1.67□□□□□ -2.14
TFRC-206ENST00000463047 KRTAP6-3Q3LI67 103 aa1.64□□□□□ -2.15
TFRC-206ENST00000463047 LCE1EQ5T753 118 aa1.64□□□□□ -2.15
TFRC-206ENST00000463047 MT1EP04732 61 aa1.63□□□□□ -2.15
TFRC-206ENST00000463047 KRTAP19-7Q3SYF9 63 aa1.63□□□□□ -2.15
TFRC-206ENST00000463047 SPRR2EP22531 72 aa1.62□□□□□ -2.15
TFRC-206ENST00000463047 SPRR2BP35325 72 aa1.62□□□□□ -2.15
TFRC-206ENST00000463047 SPRR2AP35326 72 aa1.62□□□□□ -2.15
TFRC-206ENST00000463047 MUC12Q9UKN1 5478 aa1.6□□□□□ -2.15
TFRC-206ENST00000463047 MT1LQ93083 61 aa1.59□□□□□ -2.15
TFRC-206ENST00000463047 KRTAP4-3Q9BYR4 195 aa1.59□□□□□ -2.15
TFRC-206ENST00000463047 MDN1Q9NU22 5596 aa1.58□□□□□ -2.16
TFRC-206ENST00000463047 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
TFRC-206ENST00000463047 MT1GP13640 62 aa1.57□□□□□ -2.16
TFRC-206ENST00000463047 SPRR2DP22532 72 aa1.57□□□□□ -2.16
TFRC-206ENST00000463047 DSTQ03001 7570 aaKnown RBP1.56□□□□□ -2.16
TFRC-206ENST00000463047 SYNE2Q8WXH0 6885 aaKnown RBP1.55□□□□□ -2.16
TFRC-206ENST00000463047 LCE3CQ5T5A8 94 aa1.55□□□□□ -2.16
TFRC-206ENST00000463047 MT1MQ8N339 61 aa1.54□□□□□ -2.16
TFRC-206ENST00000463047 KRTAP2-2Q9BYT5 123 aa1.54□□□□□ -2.16
TFRC-206ENST00000463047 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
TFRC-206ENST00000463047 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
TFRC-206ENST00000463047 LUZP6Q538Z0 58 aa1.48□□□□□ -2.17
TFRC-206ENST00000463047 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
TFRC-206ENST00000463047 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
TFRC-206ENST00000463047 A0A0A0MQY5 61 aa1.45□□□□□ -2.18
TFRC-206ENST00000463047 SPRR5A0A1B0GTR4 108 aa1.45□□□□□ -2.18
TFRC-206ENST00000463047 NEBP20929 6669 aa1.43□□□□□ -2.18
TFRC-206ENST00000463047 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
TFRC-206ENST00000463047 KRTAP9-6A8MVA2 160 aa1.42□□□□□ -2.18
TFRC-206ENST00000463047 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
TFRC-206ENST00000463047 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
TFRC-206ENST00000463047 NDUFAF8A1L188 74 aa1.37□□□□□ -2.19
TFRC-206ENST00000463047 MT4P47944 62 aa1.37□□□□□ -2.19
TFRC-206ENST00000463047 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
TFRC-206ENST00000463047 MT1AP04731 61 aa1.35□□□□□ -2.19
TFRC-206ENST00000463047 KRTAP12-4P60329 112 aa1.35□□□□□ -2.19
TFRC-206ENST00000463047 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
TFRC-206ENST00000463047 MT3P25713 68 aa1.3□□□□□ -2.2
TFRC-206ENST00000463047 LCE1FQ5T754 118 aa1.3□□□□□ -2.2
TFRC-206ENST00000463047 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
TFRC-206ENST00000463047 KRTAP6-2Q3LI66 62 aa1.26□□□□□ -2.21
TFRC-206ENST00000463047 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
TFRC-206ENST00000463047 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
TFRC-206ENST00000463047 LCE3DQ9BYE3 92 aa1.17□□□□□ -2.22
TFRC-206ENST00000463047 LCE3EQ5T5B0 92 aa1.13□□□□□ -2.23
TFRC-206ENST00000463047 INE1O15225 51 aa1.12□□□□□ -2.23
TFRC-206ENST00000463047 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
TFRC-206ENST00000463047 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
TFRC-206ENST00000463047 KRTAP5-7Q6L8G8 165 aa1.03□□□□□ -2.24
TFRC-206ENST00000463047 MUC5ACP98088 5654 aa1.03□□□□□ -2.25
TFRC-206ENST00000463047 LCE1CQ5T751 118 aa1.02□□□□□ -2.25
TFRC-206ENST00000463047 MUC19Q7Z5P9 8384 aa1□□□□□ -2.25
TFRC-206ENST00000463047 PRM1P04553 51 aa0.97□□□□□ -2.25
TFRC-206ENST00000463047 AHNAKQ09666 5890 aaKnown RBP0.96□□□□□ -2.26
TFRC-206ENST00000463047 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
TFRC-206ENST00000463047 KRTAP21-2Q3LI59 83 aa0.86□□□□□ -2.27
TFRC-206ENST00000463047 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
TFRC-206ENST00000463047 MUC16Q8WXI7 14507 aa0.6□□□□□ -2.31
TFRC-206ENST00000463047 KRTAP21-1Q3LI58 79 aa0.54□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 117.1 ms