RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
PDZRN3-203ENST00000462146 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
PDZRN3-203ENST00000462146 MT1LQ93083 61 aa4.01□□□□□ -1.77
PDZRN3-203ENST00000462146 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
PDZRN3-203ENST00000462146 MT1EP04732 61 aa3.98□□□□□ -1.77
PDZRN3-203ENST00000462146 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.78
PDZRN3-203ENST00000462146 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
PDZRN3-203ENST00000462146 KRTAP19-4Q3LI73 84 aa3.82□□□□□ -1.8
PDZRN3-203ENST00000462146 MT1GP13640 62 aa3.81□□□□□ -1.8
PDZRN3-203ENST00000462146 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
PDZRN3-203ENST00000462146 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.77□□□□□ -1.81
PDZRN3-203ENST00000462146 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
PDZRN3-203ENST00000462146 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
PDZRN3-203ENST00000462146 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
PDZRN3-203ENST00000462146 MT1MQ8N339 61 aa3.72□□□□□ -1.81
PDZRN3-203ENST00000462146 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
PDZRN3-203ENST00000462146 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
PDZRN3-203ENST00000462146 KRTAP9-7A8MTY7 169 aa3.63□□□□□ -1.83
PDZRN3-203ENST00000462146 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
PDZRN3-203ENST00000462146 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
PDZRN3-203ENST00000462146 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
PDZRN3-203ENST00000462146 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
PDZRN3-203ENST00000462146 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
PDZRN3-203ENST00000462146 MDN1Q9NU22 5596 aa3.55□□□□□ -1.84
PDZRN3-203ENST00000462146 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
PDZRN3-203ENST00000462146 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
PDZRN3-203ENST00000462146 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
PDZRN3-203ENST00000462146 SPRR2EP22531 72 aa3.45□□□□□ -1.86
PDZRN3-203ENST00000462146 SPRR2BP35325 72 aa3.45□□□□□ -1.86
PDZRN3-203ENST00000462146 SPRR2AP35326 72 aa3.45□□□□□ -1.86
PDZRN3-203ENST00000462146 KRTAP6-1Q3LI64 71 aa3.44□□□□□ -1.86
PDZRN3-203ENST00000462146 NEBP20929 6669 aa3.4□□□□□ -1.86
PDZRN3-203ENST00000462146 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
PDZRN3-203ENST00000462146 MT1AP04731 61 aa3.37□□□□□ -1.87
PDZRN3-203ENST00000462146 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
PDZRN3-203ENST00000462146 SPRR2DP22532 72 aa3.33□□□□□ -1.88
PDZRN3-203ENST00000462146 KRTAP5-5Q701N2 237 aaPredicted RBP3.32□□□□□ -1.88
PDZRN3-203ENST00000462146 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
PDZRN3-203ENST00000462146 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
PDZRN3-203ENST00000462146 PRM1P04553 51 aa3.28□□□□□ -1.88
PDZRN3-203ENST00000462146 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
PDZRN3-203ENST00000462146 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
PDZRN3-203ENST00000462146 KRTAP9-9Q9BYP9 154 aa3.13□□□□□ -1.91
PDZRN3-203ENST00000462146 KRTAP9-4Q9BYQ2 154 aa3.13□□□□□ -1.91
PDZRN3-203ENST00000462146 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
PDZRN3-203ENST00000462146 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
PDZRN3-203ENST00000462146 LCE1DQ5T752 114 aa3.06□□□□□ -1.92
PDZRN3-203ENST00000462146 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
PDZRN3-203ENST00000462146 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
PDZRN3-203ENST00000462146 MT3P25713 68 aa2.96□□□□□ -1.94
PDZRN3-203ENST00000462146 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
PDZRN3-203ENST00000462146 MT4P47944 62 aa2.89□□□□□ -1.95
PDZRN3-203ENST00000462146 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
PDZRN3-203ENST00000462146 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
PDZRN3-203ENST00000462146 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
PDZRN3-203ENST00000462146 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
PDZRN3-203ENST00000462146 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
PDZRN3-203ENST00000462146 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
PDZRN3-203ENST00000462146 AHNAK2Q8IVF2 5795 aa2.59□□□□□ -2
PDZRN3-203ENST00000462146 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
PDZRN3-203ENST00000462146 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
PDZRN3-203ENST00000462146 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
PDZRN3-203ENST00000462146 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.39□□□□□ -2.03
PDZRN3-203ENST00000462146 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
PDZRN3-203ENST00000462146 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
PDZRN3-203ENST00000462146 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
PDZRN3-203ENST00000462146 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
PDZRN3-203ENST00000462146 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
PDZRN3-203ENST00000462146 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
PDZRN3-203ENST00000462146 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PDZRN3-203ENST00000462146 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
PDZRN3-203ENST00000462146 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
PDZRN3-203ENST00000462146 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
PDZRN3-203ENST00000462146 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
PDZRN3-203ENST00000462146 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
PDZRN3-203ENST00000462146 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
PDZRN3-203ENST00000462146 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 97 ms