RNA–Protein interactions for RNA: ENST00000461903.1

HLA-A-205, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,352 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-205ENST00000461903 SPRR2DP22532 72 aa8.42□□□□□ -1.06
HLA-A-205ENST00000461903 KRTAP19-7Q3SYF9 63 aa8.35□□□□□ -1.07
HLA-A-205ENST00000461903 KRTAP19-5Q3LI72 72 aa8.33□□□□□ -1.08
HLA-A-205ENST00000461903 MT1EP04732 61 aa8.26□□□□□ -1.09
HLA-A-205ENST00000461903 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
HLA-A-205ENST00000461903 LCE3BQ5TA77 95 aa8.23□□□□□ -1.09
HLA-A-205ENST00000461903 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
HLA-A-205ENST00000461903 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
HLA-A-205ENST00000461903 PP632Q6XCG6 107 aa8.12□□□□□ -1.11
HLA-A-205ENST00000461903 PMAIP1Q13794 54 aa8.11□□□□□ -1.11
HLA-A-205ENST00000461903 GPR98Q8WXG9 6306 aa8.11□□□□□ -1.11
HLA-A-205ENST00000461903 KRTAP19-3Q7Z4W3 81 aa8.09□□□□□ -1.12
HLA-A-205ENST00000461903 MT1LQ93083 61 aa8□□□□□ -1.13
HLA-A-205ENST00000461903 LCE5AQ5TCM9 118 aa7.98□□□□□ -1.13
HLA-A-205ENST00000461903 MT1GP13640 62 aa7.95□□□□□ -1.14
HLA-A-205ENST00000461903 DSTQ03001 7570 aaKnown RBP7.89□□□□□ -1.15
HLA-A-205ENST00000461903 MT1MQ8N339 61 aa7.83□□□□□ -1.16
HLA-A-205ENST00000461903 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
HLA-A-205ENST00000461903 KRTAP4-9Q9BYQ8 210 aa7.79□□□□□ -1.16
HLA-A-205ENST00000461903 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
HLA-A-205ENST00000461903 PRAC1Q96KF2 57 aa7.66□□□□□ -1.18
HLA-A-205ENST00000461903 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
HLA-A-205ENST00000461903 KRTAP4-3Q9BYR4 195 aa7.6□□□□□ -1.19
HLA-A-205ENST00000461903 KTN1-AS1Q86SY8 53 aa7.59□□□□□ -1.2
HLA-A-205ENST00000461903 LCE1DQ5T752 114 aa7.58□□□□□ -1.2
HLA-A-205ENST00000461903 LCE3CQ5T5A8 94 aa7.55□□□□□ -1.2
HLA-A-205ENST00000461903 HMCN1Q96RW7 5635 aa7.47□□□□□ -1.21
HLA-A-205ENST00000461903 LCE4AQ5TA78 99 aa7.43□□□□□ -1.22
HLA-A-205ENST00000461903 MT4P47944 62 aa7.38□□□□□ -1.23
HLA-A-205ENST00000461903 AHNAK2Q8IVF2 5795 aa7.37□□□□□ -1.23
HLA-A-205ENST00000461903 KRTAP5-10Q6L8G5 202 aa7.34□□□□□ -1.23
HLA-A-205ENST00000461903 H3BS24 57 aa7.22□□□□□ -1.25
HLA-A-205ENST00000461903 KRTAP5-4Q6L8H1 288 aa7.2□□□□□ -1.26
HLA-A-205ENST00000461903 LOC100996750A0A140TA64 210 aa7.2□□□□□ -1.26
HLA-A-205ENST00000461903 KRTAP5-7Q6L8G8 165 aa7.14□□□□□ -1.27
HLA-A-205ENST00000461903 KRTAP4-6Q9BYQ5 205 aa7.13□□□□□ -1.27
HLA-A-205ENST00000461903 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
HLA-A-205ENST00000461903 KRTAP9-6A8MVA2 160 aa7.06□□□□□ -1.28
HLA-A-205ENST00000461903 KRTAP5-3Q6L8H2 238 aa7.03□□□□□ -1.28
HLA-A-205ENST00000461903 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
HLA-A-205ENST00000461903 SPRR5A0A1B0GTR4 108 aa6.85□□□□□ -1.31
HLA-A-205ENST00000461903 MT1AP04731 61 aa6.83□□□□□ -1.32
HLA-A-205ENST00000461903 KRTAP20-2Q3LI61 65 aa6.82□□□□□ -1.32
HLA-A-205ENST00000461903 KRTAP12-4P60329 112 aa6.81□□□□□ -1.32
HLA-A-205ENST00000461903 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
HLA-A-205ENST00000461903 KRTAP6-1Q3LI64 71 aa6.74□□□□□ -1.33
HLA-A-205ENST00000461903 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
HLA-A-205ENST00000461903 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
HLA-A-205ENST00000461903 KRTAP4-11Q9BYQ6 195 aa6.36□□□□□ -1.39
HLA-A-205ENST00000461903 KRTAP6-2Q3LI66 62 aa6.31□□□□□ -1.4
HLA-A-205ENST00000461903 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
HLA-A-205ENST00000461903 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
HLA-A-205ENST00000461903 MT3P25713 68 aa6.23□□□□□ -1.41
HLA-A-205ENST00000461903 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
HLA-A-205ENST00000461903 KRTAP5-8O75690 187 aa6.17□□□□□ -1.42
HLA-A-205ENST00000461903 MUC5BQ9HC84 5762 aaPredicted RBP6.15□□□□□ -1.42
HLA-A-205ENST00000461903 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
HLA-A-205ENST00000461903 OBSCNQ5VST9 7968 aa5.92□□□□□ -1.46
HLA-A-205ENST00000461903 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
HLA-A-205ENST00000461903 KRTAP5-1Q6L8H4 278 aa5.67□□□□□ -1.5
HLA-A-205ENST00000461903 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
HLA-A-205ENST00000461903 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
HLA-A-205ENST00000461903 LCE3EQ5T5B0 92 aa5.36□□□□□ -1.55
HLA-A-205ENST00000461903 LCE1BQ5T7P3 118 aa5.21□□□□□ -1.58
HLA-A-205ENST00000461903 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
HLA-A-205ENST00000461903 LCE1CQ5T751 118 aa5.14□□□□□ -1.59
HLA-A-205ENST00000461903 INE1O15225 51 aa4.94□□□□□ -1.62
HLA-A-205ENST00000461903 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
HLA-A-205ENST00000461903 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
HLA-A-205ENST00000461903 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
HLA-A-205ENST00000461903 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
HLA-A-205ENST00000461903 KRTAP21-2Q3LI59 83 aa4.4□□□□□ -1.7
HLA-A-205ENST00000461903 PRM1P04553 51 aa4.39□□□□□ -1.71
HLA-A-205ENST00000461903 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
HLA-A-205ENST00000461903 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
HLA-A-205ENST00000461903 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
HLA-A-205ENST00000461903 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
HLA-A-205ENST00000461903 MUC16Q8WXI7 14507 aa2.6□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 99.3 ms