RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SPRR2AP35326 72 aa5.89□□□□□ -1.47
TMEM39A-203ENST00000461654 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
TMEM39A-203ENST00000461654 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
TMEM39A-203ENST00000461654 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
TMEM39A-203ENST00000461654 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
TMEM39A-203ENST00000461654 SVIPQ8NHG7 77 aa5.77□□□□□ -1.49
TMEM39A-203ENST00000461654 KRTAP2-2Q9BYT5 123 aa5.71□□□□□ -1.5
TMEM39A-203ENST00000461654 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
TMEM39A-203ENST00000461654 SPRR2DP22532 72 aa5.69□□□□□ -1.5
TMEM39A-203ENST00000461654 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
TMEM39A-203ENST00000461654 KRTAP19-5Q3LI72 72 aa5.66□□□□□ -1.5
TMEM39A-203ENST00000461654 KRTAP4-12Q9BQ66 201 aa5.66□□□□□ -1.5
TMEM39A-203ENST00000461654 KRTAP19-7Q3SYF9 63 aa5.58□□□□□ -1.52
TMEM39A-203ENST00000461654 H3BS24 57 aa5.56□□□□□ -1.52
TMEM39A-203ENST00000461654 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
TMEM39A-203ENST00000461654 MT1EP04732 61 aa5.52□□□□□ -1.53
TMEM39A-203ENST00000461654 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
TMEM39A-203ENST00000461654 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
TMEM39A-203ENST00000461654 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.54
TMEM39A-203ENST00000461654 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
TMEM39A-203ENST00000461654 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
TMEM39A-203ENST00000461654 KRTAP19-4Q3LI73 84 aa5.39□□□□□ -1.55
TMEM39A-203ENST00000461654 MT1LQ93083 61 aa5.39□□□□□ -1.55
TMEM39A-203ENST00000461654 MT1GP13640 62 aa5.32□□□□□ -1.56
TMEM39A-203ENST00000461654 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
TMEM39A-203ENST00000461654 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
TMEM39A-203ENST00000461654 MT1MQ8N339 61 aa5.22□□□□□ -1.57
TMEM39A-203ENST00000461654 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
TMEM39A-203ENST00000461654 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
TMEM39A-203ENST00000461654 KRTAP4-9Q9BYQ8 210 aa5.15□□□□□ -1.59
TMEM39A-203ENST00000461654 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
TMEM39A-203ENST00000461654 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
TMEM39A-203ENST00000461654 GPR98Q8WXG9 6306 aa5.07□□□□□ -1.6
TMEM39A-203ENST00000461654 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
TMEM39A-203ENST00000461654 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
TMEM39A-203ENST00000461654 LUZP6Q538Z0 58 aa4.98□□□□□ -1.61
TMEM39A-203ENST00000461654 MT4P47944 62 aa4.96□□□□□ -1.62
TMEM39A-203ENST00000461654 HMCN1Q96RW7 5635 aa4.91□□□□□ -1.62
TMEM39A-203ENST00000461654 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
TMEM39A-203ENST00000461654 KRTAP4-11Q9BYQ6 195 aa4.86□□□□□ -1.63
TMEM39A-203ENST00000461654 KRTAP4-2Q9BYR5 136 aa4.86□□□□□ -1.63
TMEM39A-203ENST00000461654 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
TMEM39A-203ENST00000461654 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
TMEM39A-203ENST00000461654 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
TMEM39A-203ENST00000461654 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
TMEM39A-203ENST00000461654 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
TMEM39A-203ENST00000461654 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
TMEM39A-203ENST00000461654 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
TMEM39A-203ENST00000461654 MT1AP04731 61 aa4.61□□□□□ -1.67
TMEM39A-203ENST00000461654 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
TMEM39A-203ENST00000461654 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
TMEM39A-203ENST00000461654 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
TMEM39A-203ENST00000461654 KRTAP5-2Q701N4 177 aa4.36□□□□□ -1.71
TMEM39A-203ENST00000461654 MT3P25713 68 aa4.21□□□□□ -1.74
TMEM39A-203ENST00000461654 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
TMEM39A-203ENST00000461654 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
TMEM39A-203ENST00000461654 KRTAP5-8O75690 187 aa4.15□□□□□ -1.75
TMEM39A-203ENST00000461654 OBSCNQ5VST9 7968 aa3.99□□□□□ -1.77
TMEM39A-203ENST00000461654 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
TMEM39A-203ENST00000461654 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
TMEM39A-203ENST00000461654 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
TMEM39A-203ENST00000461654 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
TMEM39A-203ENST00000461654 INE1O15225 51 aa3.9□□□□□ -1.79
TMEM39A-203ENST00000461654 MUC5BQ9HC84 5762 aaPredicted RBP3.87□□□□□ -1.79
TMEM39A-203ENST00000461654 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
TMEM39A-203ENST00000461654 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
TMEM39A-203ENST00000461654 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
TMEM39A-203ENST00000461654 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
TMEM39A-203ENST00000461654 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
TMEM39A-203ENST00000461654 PRM1P04553 51 aa3.25□□□□□ -1.89
TMEM39A-203ENST00000461654 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
TMEM39A-203ENST00000461654 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
TMEM39A-203ENST00000461654 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
TMEM39A-203ENST00000461654 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
TMEM39A-203ENST00000461654 KRTAP4-4Q9BYR3 166 aa2.65□□□□□ -1.99
TMEM39A-203ENST00000461654 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
TMEM39A-203ENST00000461654 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
TMEM39A-203ENST00000461654 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 125.9 ms