RNA–Protein interactions for RNA: ENST00000461448.5

SNHG12-201, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-201ENST00000461448 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
SNHG12-201ENST00000461448 MT1EP04732 61 aa7.2□□□□□ -1.26
SNHG12-201ENST00000461448 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
SNHG12-201ENST00000461448 NEBP20929 6669 aa7.19□□□□□ -1.26
SNHG12-201ENST00000461448 KRTAP12-3P60328 96 aa7.16□□□□□ -1.26
SNHG12-201ENST00000461448 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
SNHG12-201ENST00000461448 SPRR2DP22532 72 aa7.01□□□□□ -1.29
SNHG12-201ENST00000461448 KTN1-AS1Q86SY8 53 aa6.98□□□□□ -1.29
SNHG12-201ENST00000461448 MT1LQ93083 61 aa6.98□□□□□ -1.29
SNHG12-201ENST00000461448 LCE5AQ5TCM9 118 aa6.97□□□□□ -1.29
SNHG12-201ENST00000461448 MT1GP13640 62 aa6.94□□□□□ -1.3
SNHG12-201ENST00000461448 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
SNHG12-201ENST00000461448 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
SNHG12-201ENST00000461448 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
SNHG12-201ENST00000461448 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
SNHG12-201ENST00000461448 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
SNHG12-201ENST00000461448 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
SNHG12-201ENST00000461448 MT1MQ8N339 61 aa6.83□□□□□ -1.32
SNHG12-201ENST00000461448 LCE3BQ5TA77 95 aa6.76□□□□□ -1.33
SNHG12-201ENST00000461448 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
SNHG12-201ENST00000461448 KRTAP4-3Q9BYR4 195 aa6.67□□□□□ -1.34
SNHG12-201ENST00000461448 KRTAP2-2Q9BYT5 123 aa6.66□□□□□ -1.34
SNHG12-201ENST00000461448 KRTAP2-1Q9BYU5 128 aa6.66□□□□□ -1.34
SNHG12-201ENST00000461448 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.34
SNHG12-201ENST00000461448 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
SNHG12-201ENST00000461448 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
SNHG12-201ENST00000461448 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
SNHG12-201ENST00000461448 KRTAP9-6A8MVA2 160 aa6.19□□□□□ -1.42
SNHG12-201ENST00000461448 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
SNHG12-201ENST00000461448 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
SNHG12-201ENST00000461448 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
SNHG12-201ENST00000461448 KRTAP5-4Q6L8H1 288 aa6.16□□□□□ -1.42
SNHG12-201ENST00000461448 LUZP6Q538Z0 58 aa6.1□□□□□ -1.43
SNHG12-201ENST00000461448 MT4P47944 62 aa6.1□□□□□ -1.43
SNHG12-201ENST00000461448 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
SNHG12-201ENST00000461448 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.45
SNHG12-201ENST00000461448 MT1AP04731 61 aa5.95□□□□□ -1.46
SNHG12-201ENST00000461448 KRTAP12-4P60329 112 aa5.92□□□□□ -1.46
SNHG12-201ENST00000461448 HMCN1Q96RW7 5635 aa5.91□□□□□ -1.46
SNHG12-201ENST00000461448 KRTAP6-1Q3LI64 71 aa5.88□□□□□ -1.47
SNHG12-201ENST00000461448 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
SNHG12-201ENST00000461448 KRTAP20-2Q3LI61 65 aa5.81□□□□□ -1.48
SNHG12-201ENST00000461448 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
SNHG12-201ENST00000461448 NDUFAF8A1L188 74 aa5.61□□□□□ -1.51
SNHG12-201ENST00000461448 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
SNHG12-201ENST00000461448 KRTAP6-2Q3LI66 62 aa5.52□□□□□ -1.53
SNHG12-201ENST00000461448 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
SNHG12-201ENST00000461448 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
SNHG12-201ENST00000461448 MT3P25713 68 aa5.45□□□□□ -1.54
SNHG12-201ENST00000461448 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.55
SNHG12-201ENST00000461448 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.56
SNHG12-201ENST00000461448 KRTAP4-11Q9BYQ6 195 aa5.17□□□□□ -1.58
SNHG12-201ENST00000461448 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
SNHG12-201ENST00000461448 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
SNHG12-201ENST00000461448 KRTAP5-8O75690 187 aa4.97□□□□□ -1.61
SNHG12-201ENST00000461448 LCE3DQ9BYE3 92 aa4.95□□□□□ -1.62
SNHG12-201ENST00000461448 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
SNHG12-201ENST00000461448 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
SNHG12-201ENST00000461448 LCE3EQ5T5B0 92 aa4.76□□□□□ -1.65
SNHG12-201ENST00000461448 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
SNHG12-201ENST00000461448 KRTAP9-9Q9BYP9 154 aa4.64□□□□□ -1.67
SNHG12-201ENST00000461448 INE1O15225 51 aa4.62□□□□□ -1.67
SNHG12-201ENST00000461448 LCE1BQ5T7P3 118 aa4.56□□□□□ -1.68
SNHG12-201ENST00000461448 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
SNHG12-201ENST00000461448 LCE1CQ5T751 118 aa4.5□□□□□ -1.69
SNHG12-201ENST00000461448 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
SNHG12-201ENST00000461448 AHNAKQ09666 5890 aaKnown RBP4.34□□□□□ -1.71
SNHG12-201ENST00000461448 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
SNHG12-201ENST00000461448 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
SNHG12-201ENST00000461448 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
SNHG12-201ENST00000461448 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
SNHG12-201ENST00000461448 PRM1P04553 51 aa3.92□□□□□ -1.78
SNHG12-201ENST00000461448 KRTAP21-2Q3LI59 83 aa3.85□□□□□ -1.79
SNHG12-201ENST00000461448 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
SNHG12-201ENST00000461448 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
SNHG12-201ENST00000461448 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
SNHG12-201ENST00000461448 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
SNHG12-201ENST00000461448 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms