RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
MSH2-204ENST00000461394 KRTAP10-12P60413 245 aa2.71□□□□□ -1.98
MSH2-204ENST00000461394 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
MSH2-204ENST00000461394 KRTAP10-7P60409 375 aaPredicted RBP2.69□□□□□ -1.98
MSH2-204ENST00000461394 KRTAP19-6Q3LI70 58 aa2.62□□□□□ -1.99
MSH2-204ENST00000461394 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
MSH2-204ENST00000461394 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
MSH2-204ENST00000461394 USH2AO75445 5202 aa2.56□□□□□ -2
MSH2-204ENST00000461394 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
MSH2-204ENST00000461394 SSPOA2VEC9 5147 aa2.53□□□□□ -2
MSH2-204ENST00000461394 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
MSH2-204ENST00000461394 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
MSH2-204ENST00000461394 KRTAP19-7Q3SYF9 63 aa2.46□□□□□ -2.02
MSH2-204ENST00000461394 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
MSH2-204ENST00000461394 MT1EP04732 61 aa2.44□□□□□ -2.02
MSH2-204ENST00000461394 MT1LQ93083 61 aa2.4□□□□□ -2.03
MSH2-204ENST00000461394 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
MSH2-204ENST00000461394 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
MSH2-204ENST00000461394 FSIP2Q5CZC0 6907 aa2.37□□□□□ -2.03
MSH2-204ENST00000461394 KMT2DO14686 5537 aa2.37□□□□□ -2.03
MSH2-204ENST00000461394 FCGBPQ9Y6R7 5405 aaPredicted RBP2.36□□□□□ -2.03
MSH2-204ENST00000461394 KRTAP19-3Q7Z4W3 81 aa2.34□□□□□ -2.03
MSH2-204ENST00000461394 MT1GP13640 62 aa2.32□□□□□ -2.04
MSH2-204ENST00000461394 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
MSH2-204ENST00000461394 MT1MQ8N339 61 aa2.3□□□□□ -2.04
MSH2-204ENST00000461394 SPRR2EP22531 72 aa2.27□□□□□ -2.05
MSH2-204ENST00000461394 SPRR2BP35325 72 aa2.27□□□□□ -2.05
MSH2-204ENST00000461394 SPRR2AP35326 72 aa2.27□□□□□ -2.05
MSH2-204ENST00000461394 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
MSH2-204ENST00000461394 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
MSH2-204ENST00000461394 KRTAP5-9P26371 169 aa2.25□□□□□ -2.05
MSH2-204ENST00000461394 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
MSH2-204ENST00000461394 MACF1Q9UPN3 7388 aaKnown RBP2.21□□□□□ -2.06
MSH2-204ENST00000461394 SPRR2DP22532 72 aa2.19□□□□□ -2.06
MSH2-204ENST00000461394 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
MSH2-204ENST00000461394 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
MSH2-204ENST00000461394 SYNE2Q8WXH0 6885 aaKnown RBP2.12□□□□□ -2.07
MSH2-204ENST00000461394 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
MSH2-204ENST00000461394 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
MSH2-204ENST00000461394 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
MSH2-204ENST00000461394 INE1O15225 51 aa2.09□□□□□ -2.07
MSH2-204ENST00000461394 MT1AP04731 61 aa2.04□□□□□ -2.08
MSH2-204ENST00000461394 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
MSH2-204ENST00000461394 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
MSH2-204ENST00000461394 KRTAP5-5Q701N2 237 aaPredicted RBP2.01□□□□□ -2.09
MSH2-204ENST00000461394 MDN1Q9NU22 5596 aa2.01□□□□□ -2.09
MSH2-204ENST00000461394 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
MSH2-204ENST00000461394 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
MSH2-204ENST00000461394 NEBP20929 6669 aa1.93□□□□□ -2.1
MSH2-204ENST00000461394 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
MSH2-204ENST00000461394 MT4P47944 62 aa1.9□□□□□ -2.11
MSH2-204ENST00000461394 KRTAP5-4Q6L8H1 288 aa1.89□□□□□ -2.11
MSH2-204ENST00000461394 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
MSH2-204ENST00000461394 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
MSH2-204ENST00000461394 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
MSH2-204ENST00000461394 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
MSH2-204ENST00000461394 KRTAP20-2Q3LI61 65 aa1.81□□□□□ -2.12
MSH2-204ENST00000461394 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
MSH2-204ENST00000461394 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
MSH2-204ENST00000461394 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
MSH2-204ENST00000461394 PRM1P04553 51 aa1.62□□□□□ -2.15
MSH2-204ENST00000461394 KRTAP5-1Q6L8H4 278 aa1.59□□□□□ -2.15
MSH2-204ENST00000461394 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
MSH2-204ENST00000461394 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
MSH2-204ENST00000461394 AHNAK2Q8IVF2 5795 aa1.54□□□□□ -2.16
MSH2-204ENST00000461394 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
MSH2-204ENST00000461394 LCE1CQ5T751 118 aa1.49□□□□□ -2.17
MSH2-204ENST00000461394 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
MSH2-204ENST00000461394 KRTAP5-10Q6L8G5 202 aa1.45□□□□□ -2.18
MSH2-204ENST00000461394 KRTAP5-7Q6L8G8 165 aa1.41□□□□□ -2.18
MSH2-204ENST00000461394 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
MSH2-204ENST00000461394 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
MSH2-204ENST00000461394 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
MSH2-204ENST00000461394 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
MSH2-204ENST00000461394 MUC19Q7Z5P9 8384 aa1.1□□□□□ -2.23
MSH2-204ENST00000461394 PHGR1C9JFL3 82 aa1.09□□□□□ -2.23
MSH2-204ENST00000461394 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
MSH2-204ENST00000461394 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 216.6 ms