RNA–Protein interactions for RNA: ENST00000460469.1

NMD3-202, Transcript of NMD3 ribosome export adaptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NMD3, Length 3,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-202ENST00000460469 KRTAP2-3P0C7H8 128 aa5.83□□□□□ -1.48
NMD3-202ENST00000460469 KRTAP2-4Q9BYR9 128 aa5.83□□□□□ -1.48
NMD3-202ENST00000460469 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
NMD3-202ENST00000460469 CRCT1Q9UGL9 99 aa5.81□□□□□ -1.48
NMD3-202ENST00000460469 MT1GP13640 62 aa5.76□□□□□ -1.49
NMD3-202ENST00000460469 LCE2DQ5TA82 110 aaPredicted RBP5.73□□□□□ -1.49
NMD3-202ENST00000460469 KRTAP19-6Q3LI70 58 aa5.7□□□□□ -1.5
NMD3-202ENST00000460469 SYNE1Q8NF91 8797 aaKnown RBP5.65□□□□□ -1.5
NMD3-202ENST00000460469 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
NMD3-202ENST00000460469 MT1MQ8N339 61 aa5.57□□□□□ -1.52
NMD3-202ENST00000460469 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
NMD3-202ENST00000460469 KRTAP19-3Q7Z4W3 81 aa5.53□□□□□ -1.52
NMD3-202ENST00000460469 MDN1Q9NU22 5596 aa5.5□□□□□ -1.53
NMD3-202ENST00000460469 SPRR2FQ96RM1 72 aa5.47□□□□□ -1.53
NMD3-202ENST00000460469 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
NMD3-202ENST00000460469 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
NMD3-202ENST00000460469 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
NMD3-202ENST00000460469 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
NMD3-202ENST00000460469 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
NMD3-202ENST00000460469 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
NMD3-202ENST00000460469 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
NMD3-202ENST00000460469 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
NMD3-202ENST00000460469 KRTAP9-2Q9BYQ4 174 aa4.93□□□□□ -1.62
NMD3-202ENST00000460469 MT1AP04731 61 aa4.91□□□□□ -1.62
NMD3-202ENST00000460469 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
NMD3-202ENST00000460469 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.62
NMD3-202ENST00000460469 SPRR2EP22531 72 aa4.89□□□□□ -1.63
NMD3-202ENST00000460469 SPRR2BP35325 72 aa4.89□□□□□ -1.63
NMD3-202ENST00000460469 SPRR2AP35326 72 aa4.89□□□□□ -1.63
NMD3-202ENST00000460469 KRTAP5-5Q701N2 237 aaPredicted RBP4.83□□□□□ -1.64
NMD3-202ENST00000460469 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
NMD3-202ENST00000460469 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
NMD3-202ENST00000460469 PRM1P04553 51 aa4.75□□□□□ -1.65
NMD3-202ENST00000460469 SPRR2DP22532 72 aa4.65□□□□□ -1.67
NMD3-202ENST00000460469 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
NMD3-202ENST00000460469 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
NMD3-202ENST00000460469 MT3P25713 68 aa4.42□□□□□ -1.7
NMD3-202ENST00000460469 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.7
NMD3-202ENST00000460469 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
NMD3-202ENST00000460469 KRTAP4-6Q9BYQ5 205 aa4.31□□□□□ -1.72
NMD3-202ENST00000460469 MT4P47944 62 aa4.28□□□□□ -1.72
NMD3-202ENST00000460469 NEBP20929 6669 aa4.18□□□□□ -1.74
NMD3-202ENST00000460469 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.74
NMD3-202ENST00000460469 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
NMD3-202ENST00000460469 HMCN1Q96RW7 5635 aa4.13□□□□□ -1.75
NMD3-202ENST00000460469 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
NMD3-202ENST00000460469 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
NMD3-202ENST00000460469 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
NMD3-202ENST00000460469 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
NMD3-202ENST00000460469 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
NMD3-202ENST00000460469 LCE1BQ5T7P3 118 aa3.81□□□□□ -1.8
NMD3-202ENST00000460469 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
NMD3-202ENST00000460469 KRTAP5-3Q6L8H2 238 aa3.76□□□□□ -1.81
NMD3-202ENST00000460469 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
NMD3-202ENST00000460469 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
NMD3-202ENST00000460469 KRTAP5-10Q6L8G5 202 aa3.56□□□□□ -1.84
NMD3-202ENST00000460469 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
NMD3-202ENST00000460469 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
NMD3-202ENST00000460469 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
NMD3-202ENST00000460469 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
NMD3-202ENST00000460469 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
NMD3-202ENST00000460469 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
NMD3-202ENST00000460469 KRTAP21-2Q3LI59 83 aa3.27□□□□□ -1.89
NMD3-202ENST00000460469 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
NMD3-202ENST00000460469 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
NMD3-202ENST00000460469 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
NMD3-202ENST00000460469 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
NMD3-202ENST00000460469 KRTAP5-8O75690 187 aa3.15□□□□□ -1.91
NMD3-202ENST00000460469 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
NMD3-202ENST00000460469 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.94
NMD3-202ENST00000460469 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
NMD3-202ENST00000460469 KRTAP5-11Q6L8G4 156 aa2.83□□□□□ -1.96
NMD3-202ENST00000460469 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
NMD3-202ENST00000460469 LCE1FQ5T754 118 aa2.57□□□□□ -2
NMD3-202ENST00000460469 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
NMD3-202ENST00000460469 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
NMD3-202ENST00000460469 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 208.2 ms