RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
SFPQ-202ENST00000460428 KRTAP19-4Q3LI73 84 aa2.98□□□□□ -1.93
SFPQ-202ENST00000460428 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
SFPQ-202ENST00000460428 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
SFPQ-202ENST00000460428 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
SFPQ-202ENST00000460428 MT1EP04732 61 aa2.92□□□□□ -1.94
SFPQ-202ENST00000460428 CRCT1Q9UGL9 99 aa2.91□□□□□ -1.94
SFPQ-202ENST00000460428 FCGBPQ9Y6R7 5405 aaPredicted RBP2.91□□□□□ -1.94
SFPQ-202ENST00000460428 KMT2DO14686 5537 aa2.91□□□□□ -1.94
SFPQ-202ENST00000460428 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
SFPQ-202ENST00000460428 LCE3CQ5T5A8 94 aa2.86□□□□□ -1.95
SFPQ-202ENST00000460428 MT1LQ93083 61 aa2.86□□□□□ -1.95
SFPQ-202ENST00000460428 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
SFPQ-202ENST00000460428 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
SFPQ-202ENST00000460428 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
SFPQ-202ENST00000460428 MT1GP13640 62 aa2.79□□□□□ -1.96
SFPQ-202ENST00000460428 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
SFPQ-202ENST00000460428 KRTAP19-3Q7Z4W3 81 aa2.79□□□□□ -1.96
SFPQ-202ENST00000460428 SPRR2FQ96RM1 72 aa2.75□□□□□ -1.97
SFPQ-202ENST00000460428 MT1MQ8N339 61 aa2.74□□□□□ -1.97
SFPQ-202ENST00000460428 MACF1Q9UPN3 7388 aaKnown RBP2.73□□□□□ -1.97
SFPQ-202ENST00000460428 KRTAP9-6A8MVA2 160 aa2.71□□□□□ -1.98
SFPQ-202ENST00000460428 KRTAP6-3Q3LI67 103 aa2.7□□□□□ -1.98
SFPQ-202ENST00000460428 LCE1AQ5T7P2 110 aa2.68□□□□□ -1.98
SFPQ-202ENST00000460428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
SFPQ-202ENST00000460428 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.99
SFPQ-202ENST00000460428 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
SFPQ-202ENST00000460428 SPRR2EP22531 72 aa2.59□□□□□ -1.99
SFPQ-202ENST00000460428 SPRR2BP35325 72 aa2.59□□□□□ -1.99
SFPQ-202ENST00000460428 SPRR2AP35326 72 aa2.59□□□□□ -1.99
SFPQ-202ENST00000460428 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
SFPQ-202ENST00000460428 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
SFPQ-202ENST00000460428 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
SFPQ-202ENST00000460428 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
SFPQ-202ENST00000460428 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
SFPQ-202ENST00000460428 A0A0A0MQY5 61 aa2.5□□□□□ -2.01
SFPQ-202ENST00000460428 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
SFPQ-202ENST00000460428 SPRR2DP22532 72 aa2.49□□□□□ -2.01
SFPQ-202ENST00000460428 MT1AP04731 61 aa2.45□□□□□ -2.02
SFPQ-202ENST00000460428 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
SFPQ-202ENST00000460428 INE1O15225 51 aa2.39□□□□□ -2.03
SFPQ-202ENST00000460428 KRTAP6-1Q3LI64 71 aa2.39□□□□□ -2.03
SFPQ-202ENST00000460428 NEBP20929 6669 aa2.39□□□□□ -2.03
SFPQ-202ENST00000460428 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
SFPQ-202ENST00000460428 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
SFPQ-202ENST00000460428 KRTAP5-11Q6L8G4 156 aa2.31□□□□□ -2.04
SFPQ-202ENST00000460428 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
SFPQ-202ENST00000460428 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
SFPQ-202ENST00000460428 KRTAP5-1Q6L8H4 278 aa2.24□□□□□ -2.05
SFPQ-202ENST00000460428 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
SFPQ-202ENST00000460428 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
SFPQ-202ENST00000460428 MT3P25713 68 aa2.21□□□□□ -2.06
SFPQ-202ENST00000460428 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
SFPQ-202ENST00000460428 KRTAP20-2Q3LI61 65 aa2.17□□□□□ -2.06
SFPQ-202ENST00000460428 KRTAP5-2Q701N4 177 aa2.16□□□□□ -2.06
SFPQ-202ENST00000460428 LCE3DQ9BYE3 92 aa2.15□□□□□ -2.07
SFPQ-202ENST00000460428 MT4P47944 62 aa2.14□□□□□ -2.07
SFPQ-202ENST00000460428 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
SFPQ-202ENST00000460428 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
SFPQ-202ENST00000460428 LCE1EQ5T753 118 aa1.95□□□□□ -2.1
SFPQ-202ENST00000460428 OBSCNQ5VST9 7968 aa1.93□□□□□ -2.1
SFPQ-202ENST00000460428 PRM1P04553 51 aa1.84□□□□□ -2.11
SFPQ-202ENST00000460428 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
SFPQ-202ENST00000460428 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.12
SFPQ-202ENST00000460428 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
SFPQ-202ENST00000460428 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
SFPQ-202ENST00000460428 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
SFPQ-202ENST00000460428 LCE1BQ5T7P3 118 aa1.8□□□□□ -2.12
SFPQ-202ENST00000460428 LCE1FQ5T754 118 aa1.79□□□□□ -2.12
SFPQ-202ENST00000460428 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.13
SFPQ-202ENST00000460428 MUC5ACP98088 5654 aa1.72□□□□□ -2.13
SFPQ-202ENST00000460428 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
SFPQ-202ENST00000460428 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
SFPQ-202ENST00000460428 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SFPQ-202ENST00000460428 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SFPQ-202ENST00000460428 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
SFPQ-202ENST00000460428 MUC19Q7Z5P9 8384 aa1.12□□□□□ -2.23
SFPQ-202ENST00000460428 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 65.6 ms